HL_4V79_038

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

4V79|1|AA|A|1519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V79_038 not in the Motif Atlas

Homologous match to HL_4LFB_032

Geometric discrepancy: 0.291

The information below is about HL_4LFB_032

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4V79|1|AA|G|1515
4V79|1|AA|G|1516
4V79|1|AA|G|1517
4V79|1|AA|A|1518
4V79|1|AA|A|1519
4V79|1|AA|C|1520

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain BA

Large subunit ribosomal RNA; LSU rRNA