HL_4V79_039
3D structure
- PDB id
- 4V79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 15 Å
Loop
- Sequence
- UGCUAAUCUG
- Length
- 10 nucleotides
- Bulged bases
- 4V79|1|BA|C|61
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V79_039 not in the Motif Atlas
- Homologous match to HL_7A0S_001
- Geometric discrepancy: 0.506
- The information below is about HL_7A0S_001
- Detailed Annotation
- Pseudoknot with intercalation
- Broad Annotation
- No text annotation
- Motif group
- HL_93438.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4V79|1|BA|U|59
4V79|1|BA|G|60
4V79|1|BA|C|61
4V79|1|BA|U|62
4V79|1|BA|A|63
4V79|1|BA|A|64
4V79|1|BA|U|65
4V79|1|BA|C|66
4V79|1|BA|U|67
4V79|1|BA|G|68
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BT
- 50S ribosomal protein L23
- Chain BY
- 50S ribosomal protein L29
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