HL_4V79_060

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

UGUUGAAAAA

Length

10 nucleotides

Bulged bases

4V79|1|BA|U|747, 4V79|1|BA|A|751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V79_060 not in the Motif Atlas

Homologous match to HL_4WF9_023

Geometric discrepancy: 0.4672

The information below is about HL_4WF9_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_88205.2

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

4V79|1|BA|U|744
4V79|1|BA|G|745
4V79|1|BA|U|746
4V79|1|BA|U|747
4V79|1|BA|G|748
4V79|1|BA|A|749
4V79|1|BA|A|750
4V79|1|BA|A|751
4V79|1|BA|A|752
4V79|1|BA|A|753

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BD

50S ribosomal protein L3

Chain BS

50S ribosomal protein L22