HL_4V79_073

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GGUUAAUAUUCC

Length

12 nucleotides

Bulged bases

4V79|1|BA|U|1396, 4V79|1|BA|U|1397

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V79_073 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.2846

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_05426.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

4V79|1|BA|G|1388
4V79|1|BA|G|1389
4V79|1|BA|U|1390
4V79|1|BA|U|1391
4V79|1|BA|A|1392
4V79|1|BA|A|1393
4V79|1|BA|U|1394
4V79|1|BA|A|1395
4V79|1|BA|U|1396
4V79|1|BA|U|1397
4V79|1|BA|C|1398
4V79|1|BA|C|1399

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BT

50S ribosomal protein L23