HL_4V79_085

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

4V79|1|BA|C|1870

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V79_085 not in the Motif Atlas

Geometric match to HL_1P6V_001

Geometric discrepancy: 0.2554

The information below is about HL_1P6V_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

4V79|1|BA|C|1868
4V79|1|BA|G|1869
4V79|1|BA|C|1870
4V79|1|BA|A|1871
4V79|1|BA|A|1872
4V79|1|BA|G|1873

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B5

50S ribosomal protein L1