3D structure

PDB id
4V7A (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
AACUGAGACACGGU
Length
14 nucleotides
Bulged bases
4V7A|1|AA|C|328
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V7A_011 not in the Motif Atlas
Homologous match to HL_4LFB_008
Geometric discrepancy: 0.5079
The information below is about HL_4LFB_008
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_81205.3
Basepair signature
cWW-cWW-tWH-F-tWH-F-F-F-F-F
Number of instances in this motif group
2

Unit IDs

4V7A|1|AA|A|320
4V7A|1|AA|A|321
4V7A|1|AA|C|322
4V7A|1|AA|U|323
4V7A|1|AA|G|324
4V7A|1|AA|A|325
4V7A|1|AA|G|326
4V7A|1|AA|A|327
4V7A|1|AA|C|328
4V7A|1|AA|A|329
4V7A|1|AA|C|330
4V7A|1|AA|G|331
4V7A|1|AA|G|332
4V7A|1|AA|U|333

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AP
30S ribosomal protein S16
Chain AT
30S ribosomal protein S20

Coloring options:


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