HL_4V7A_106

3D structure

PDB id

4V7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GUCUC

Length

5 nucleotides

Bulged bases

4V7A|1|BB|U|87, 4V7A|1|BB|C|88, 4V7A|1|BB|U|89

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7A_106 not in the Motif Atlas

Geometric match to HL_4KR9_003

Geometric discrepancy: 0.3883

The information below is about HL_4KR9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_16651.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

4V7A|1|BB|G|86
4V7A|1|BB|U|87
4V7A|1|BB|C|88
4V7A|1|BB|U|89
4V7A|1|BB|C|90

Current chains

Chain BB

5S ribosomal RNA

Nearby chains

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BM

50S ribosomal protein L16

Chain BV

50S ribosomal protein L25