Loop HL_4V7B

3D structure

PDB id: 4V7B (explore in PDB, NAKB, or RNA 3D Hub)
Description: Visualization of two tRNAs trapped in transit during EF-G-mediated translocation
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.8 Å

Loop

Sequence: UUGAGCCUUGAUGGAAGUGUGGACGCCAGUCUGCAUGGCUUUAAUGUUUGA
Length: 51 nucleotides
Bulged bases: 4V7B|1|BA|C|2143, 4V7B|1|BA|A|2147, 4V7B|1|BA|U|2149, 4V7B|1|BA|C|2179
QA status: Missing nucleotides

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4V7B|1|BA|U|2098
4V7B|1|BA|U|2099
4V7B|1|BA|G|2100
4V7B|1|BA|A|2101
4V7B|1|BA|G|2102
4V7B|1|BA|C|2103
4V7B|1|BA|C|2104
4V7B|1|BA|U|2105
4V7B|1|BA|U|2106
4V7B|1|BA|G|2107
4V7B|1|BA|A|2108
4V7B|1|BA|U|2109
4V7B|1|BA|G|2110
4V7B|1|BA|G|2133
4V7B|1|BA|A|2134
4V7B|1|BA|A|2135
4V7B|1|BA|G|2136
4V7B|1|BA|U|2137
4V7B|1|BA|G|2138
4V7B|1|BA|U|2139
4V7B|1|BA|G|2140
4V7B|1|BA|G|2141
4V7B|1|BA|A|2142
4V7B|1|BA|C|2143
4V7B|1|BA|G|2144
4V7B|1|BA|C|2145
4V7B|1|BA|C|2146
4V7B|1|BA|A|2147
4V7B|1|BA|G|2148
4V7B|1|BA|U|2149
4V7B|1|BA|C|2150
4V7B|1|BA|U|2151
4V7B|1|BA|G|2152
4V7B|1|BA|C|2153
4V7B|1|BA|A|2154
4V7B|1|BA|U|2155
4V7B|1|BA|G|2156
4V7B|1|BA|G|2157
4V7B|1|BA|C|2179
4V7B|1|BA|U|2180
4V7B|1|BA|U|2181
4V7B|1|BA|U|2182
4V7B|1|BA|A|2183
4V7B|1|BA|A|2184
4V7B|1|BA|U|2185
4V7B|1|BA|G|2186
4V7B|1|BA|U|2187
4V7B|1|BA|U|2188
4V7B|1|BA|U|2189
4V7B|1|BA|G|2190
4V7B|1|BA|A|2191

Current chains

Chain BA: 23S ribosomal RNA

Nearby chains

Chain AK: 30S ribosomal protein S11
Chain AW: Transfer RNA; tRNA
Chain BH: 50S ribosomal protein L9

HL_4V7B_089