HL_4V7C_060

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

UGUUGAAAAA

Length

10 nucleotides

Bulged bases

4V7C|1|BA|U|747, 4V7C|1|BA|A|751

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7C_060 not in the Motif Atlas

Homologous match to HL_4WF9_023

Geometric discrepancy: 0.2131

The information below is about HL_4WF9_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50204.1

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

11

Unit IDs

4V7C|1|BA|U|744
4V7C|1|BA|G|745
4V7C|1|BA|U|746
4V7C|1|BA|U|747
4V7C|1|BA|G|748
4V7C|1|BA|A|749
4V7C|1|BA|A|750
4V7C|1|BA|A|751
4V7C|1|BA|A|752
4V7C|1|BA|A|753

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B3

50S ribosomal protein L32

Chain B5

50S ribosomal protein L34

Chain BE

50S ribosomal protein L3

Chain BF

50S ribosomal protein L4

Chain BU

50S ribosomal protein L22