Valid loops

No loops found

Problematic loops

#loop idProblemSequence
HL_4V7C_001No text annotation
HL_4V7C_110No text annotation
HL_4V7C_002No text annotation
HL_4V7C_111GNRA with extra near cWW
HL_4V7C_003GNRA
HL_4V7C_004GNRA
HL_4V7C_112No text annotation
HL_4V7C_005No text annotation
HL_4V7C_006GNRA related
HL_4V7C_007GNRA
HL_4V7C_113No text annotation
HL_4V7C_008No text annotation
HL_4V7C_114No text annotation
HL_4V7C_009UNCG
HL_4V7C_115tRNA anticodon loop
HL_4V7C_010GNRA
HL_4V7C_011UNCG
HL_4V7C_012No text annotation
HL_4V7C_137GNRA wlth extra near cWW
HL_4V7C_116No text annotation
HL_4V7C_013GNRA with extra near cWW
HL_4V7C_014GNRA-like with tWH
HL_4V7C_015No text annotation
HL_4V7C_016GNRA
HL_4V7C_017No text annotation
HL_4V7C_018No text annotation
HL_4V7C_019GNRA
HL_4V7C_020GNRA
HL_4V7C_021No text annotation
HL_4V7C_022GNRA
HL_4V7C_023No text annotation
HL_4V7C_024GNRA
HL_4V7C_025T-loop related
HL_4V7C_117No text annotation
HL_4V7C_026No text annotation
HL_4V7C_027GNRA
HL_4V7C_028GNRA
HL_4V7C_029T-loop with 3 stacked bulged bases
HL_4V7C_030No text annotation
HL_4V7C_118No text annotation
HL_4V7C_031UNCG
HL_4V7C_032GNRA
HL_4V7C_033No text annotation
HL_4V7C_034tRNA anticodon loop
HL_4V7C_119No text annotation
HL_4V7C_035T-loop with 2 stacked bulged bases
HL_4V7C_036No text annotation
HL_4V7C_037No text annotation
HL_4V7C_120tRNA anticodon loop
HL_4V7C_038T-loop with 2 stacked bulged bases
HL_4V7C_039No text annotation
HL_4V7C_040No text annotation
HL_4V7C_041No text annotation
HL_4V7C_042No text annotation
HL_4V7C_043No text annotation
HL_4V7C_121No text annotation
HL_4V7C_044No text annotation
HL_4V7C_045No text annotation
HL_4V7C_046No text annotation
HL_4V7C_047T-loop with 2 stacked bulged bases
HL_4V7C_048No text annotation
HL_4V7C_049T-loop with unstacked turn
HL_4V7C_050No text annotation
HL_4V7C_138No text annotation
HL_4V7C_051Pseudoknot geometry
HL_4V7C_052GNRA
HL_4V7C_053GNRA
HL_4V7C_054No text annotation
HL_4V7C_122No text annotation
HL_4V7C_055T-loop with 2 stacked bulged bases
HL_4V7C_056No text annotation
HL_4V7C_057GNRA
HL_4V7C_058No text annotation
HL_4V7C_059GNRA wlth tandem sheared
HL_4V7C_060No text annotation
HL_4V7C_061No text annotation
HL_4V7C_062No text annotation
HL_4V7C_123No text annotation
HL_4V7C_139No text annotation
HL_4V7C_063No text annotation
HL_4V7C_064GNRA
HL_4V7C_065No text annotation
HL_4V7C_066No text annotation
HL_4V7C_124No text annotation
HL_4V7C_067GNRA wlth tandem sheared
HL_4V7C_125No text annotation
HL_4V7C_068No text annotation
HL_4V7C_140No text annotation
HL_4V7C_069GNRA
HL_4V7C_070T-loop with 2 stacked bulged bases
HL_4V7C_071Pseudoknot geometry with 3' bulge
HL_4V7C_072GNRA
HL_4V7C_073No text annotation
HL_4V7C_126UNCG variation
HL_4V7C_074Mini UNCG with extended bulge
HL_4V7C_127No text annotation
HL_4V7C_075Pseudoknot geometry with 3' bulge
HL_4V7C_076UNCG
HL_4V7C_077Mini UNCG
HL_4V7C_078No text annotation
HL_4V7C_079GNRA
HL_4V7C_128No text annotation
HL_4V7C_080No text annotation
HL_4V7C_081No text annotation
HL_4V7C_082No text annotation
HL_4V7C_083No text annotation
HL_4V7C_084GNRA related
HL_4V7C_129No text annotation
HL_4V7C_085GNRA variation
HL_4V7C_086No text annotation
HL_4V7C_087No text annotation
HL_4V7C_141No text annotation
HL_4V7C_088No text annotation
HL_4V7C_089No text annotation
HL_4V7C_090No text annotation
HL_4V7C_091No text annotation
HL_4V7C_092No text annotation
HL_4V7C_130No text annotation
HL_4V7C_093No text annotation
HL_4V7C_094No text annotation
HL_4V7C_131Pseudoknot geometry
HL_4V7C_132GNRA with extra cWW
HL_4V7C_095GNRA
HL_4V7C_096GNRA
HL_4V7C_133tRNA anticodon loop
HL_4V7C_097No text annotation
HL_4V7C_134No text annotation
HL_4V7C_098No text annotation
HL_4V7C_135No text annotation
HL_4V7C_099GNRA variation
HL_4V7C_136No text annotation
HL_4V7C_100No text annotation
HL_4V7C_101GNRA
HL_4V7C_102GNRA
HL_4V7C_103Ribsomal LSU H95
HL_4V7C_104No text annotation
HL_4V7C_105UNCG variation
HL_4V7C_106No text annotation
HL_4V7C_107GNRA
HL_4V7C_108No text annotation
HL_4V7C_109Mini UNCG

Valid loops

No loops found

Problematic loops

#loop idProblemSequence
IL_4V7C_202Isolated non-canonical cWW pair
IL_4V7C_001Single bulged G
IL_4V7C_002Isolated non-canonical cWW pair
IL_4V7C_203Single bulged A
IL_4V7C_003No text annotation
IL_4V7C_004Minor groove platform
IL_4V7C_005Multiple bulged bases
IL_4V7C_006Minor groove platform with extra cWW
IL_4V7C_007No text annotation
IL_4V7C_204No text annotation
IL_4V7C_008Major groove intercalation
IL_4V7C_009No text annotation
IL_4V7C_010Partly complementary
IL_4V7C_205No text annotation
IL_4V7C_252No text annotation
IL_4V7C_011No text annotation
IL_4V7C_012Isolated cWH basepair
IL_4V7C_253No text annotation
IL_4V7C_206No text annotation
IL_4V7C_013No text annotation
IL_4V7C_014No text annotation
IL_4V7C_015Kink-turn with non-sequential stacking
IL_4V7C_207No text annotation
IL_4V7C_016No text annotation
IL_4V7C_254No text annotation
IL_4V7C_017No text annotation
IL_4V7C_255C-loop
IL_4V7C_018C-loop
IL_4V7C_208Single bulged G
IL_4V7C_019Single bulged G, near cWW
IL_4V7C_020No text annotation
IL_4V7C_021No text annotation
IL_4V7C_022tSH-tHW-tWW
IL_4V7C_023No text annotation
IL_4V7C_256No text annotation
IL_4V7C_209No text annotation
IL_4V7C_024No text annotation
IL_4V7C_025SSU/LSU pseudoknot
IL_4V7C_210No text annotation
IL_4V7C_026Kink-turn related
IL_4V7C_027No text annotation
IL_4V7C_028tSH-tHW-tHS
IL_4V7C_029Major groove platform
IL_4V7C_211Major groove minor groove platform with extra cWW
IL_4V7C_030No text annotation
IL_4V7C_257Major groove minor groove platform; mini C-loop
IL_4V7C_031No text annotation
IL_4V7C_032Major groove platform; stack outside cWW
IL_4V7C_212No text annotation
IL_4V7C_033Single stack bend
IL_4V7C_213Partly complementary
IL_4V7C_034Tandem non-canonical cWW pairs
IL_4V7C_258Triple non-canonical cWW pairs
IL_4V7C_214No text annotation
IL_4V7C_035Kink-turn
IL_4V7C_036Left turn
IL_4V7C_037tSH-tHW-tHS
IL_4V7C_0388x6 Sarcin-Ricin with inserted Y; G-bulge
IL_4V7C_259Single bulged A
IL_4V7C_039Single bulged G
IL_4V7C_040Isolated non-canonical cWW pair
IL_4V7C_041Minor groove platform
IL_4V7C_042Minor groove platform
IL_4V7C_215No text annotation
IL_4V7C_043Isolated non-canonical cWW pair
IL_4V7C_044Multiple bulged bases
IL_4V7C_045Single stack bend
IL_4V7C_046Isolated non-canonical cWW pair
IL_4V7C_047Single bulged U
IL_4V7C_216No text annotation
IL_4V7C_048Tandem non-canonical cWW pairs
IL_4V7C_217Isolated cWS basepair
IL_4V7C_218No text annotation
IL_4V7C_219Minor groove platform with extra cWW
IL_4V7C_049Minor groove platform
IL_4V7C_050Single bulged A
IL_4V7C_051Isolated non-canonical cWW pair
IL_4V7C_052Isolated non-canonical cWW pair
IL_4V7C_220No text annotation
IL_4V7C_053Isolated non-canonical cWW pair
IL_4V7C_260No text annotation
IL_4V7C_054No text annotation
IL_4V7C_055Minor groove platform
IL_4V7C_056No text annotation
IL_4V7C_057No text annotation
IL_4V7C_221No text annotation
IL_4V7C_058180 degree turn
IL_4V7C_059Double sheared with non-canonical cWW
IL_4V7C_060No text annotation
IL_4V7C_061Isolated non-canonical cWW pair
IL_4V7C_062No text annotation
IL_4V7C_063No text annotation
IL_4V7C_064Isolated non-canonical cWW pair
IL_4V7C_065Decoding loop related
IL_4V7C_066Tandem non-canonical cWW pairs
IL_4V7C_222Double sheared
IL_4V7C_067No text annotation
IL_4V7C_068No text annotation
IL_4V7C_069Single bulged A
IL_4V7C_070No text annotation
IL_4V7C_223No text annotation
IL_4V7C_071No text annotation
IL_4V7C_072Isolated non-canonical cWW pair
IL_4V7C_073Isolated non-canonical cWW pair
IL_4V7C_074Isolated non-canonical cWW pair
IL_4V7C_075Single bulged A
IL_4V7C_076Isolated non-canonical cWW pair
IL_4V7C_077Minor groove platform with extra cWW
IL_4V7C_078No text annotation
IL_4V7C_079Single stack bend
IL_4V7C_0808x7 Sarcin-Ricin; G-bulge
IL_4V7C_0817x6 Sarcin-Ricin; G-bulge
IL_4V7C_082Isolated non-canonical cWW pair
IL_4V7C_083No text annotation
IL_4V7C_224No text annotation
IL_4V7C_084Isolated non-canonical cWW pair
IL_4V7C_085No text annotation
IL_4V7C_086No text annotation
IL_4V7C_087Double sheared
IL_4V7C_088Isolated non-canonical cWW pair
IL_4V7C_089No text annotation
IL_4V7C_090AAA cross-strand stack
IL_4V7C_091Isolated non-canonical cWW pair
IL_4V7C_092tHW-tHW cross-strand stack
IL_4V7C_093Single bulged A
IL_4V7C_094Single bulged G
IL_4V7C_095Triple sheared
IL_4V7C_225No text annotation
IL_4V7C_096Major groove platform
IL_4V7C_097Multiple bulged bases
IL_4V7C_09890 degree turn
IL_4V7C_226No text annotation
IL_4V7C_099Stack outside cWW
IL_4V7C_100Single stack bend
IL_4V7C_227No text annotation
IL_4V7C_1017x7 Sarcin-Ricin with intercalated A; G-bulge
IL_4V7C_261No text annotation
IL_4V7C_102Single bulged G
IL_4V7C_103No text annotation
IL_4V7C_228No text annotation
IL_4V7C_262No text annotation
IL_4V7C_104Isolated non-canonical cWW pair
IL_4V7C_105No text annotation
IL_4V7C_106Isolated non-canonical cWW pair
IL_4V7C_107Single bulged C
IL_4V7C_108UAA/GAN
IL_4V7C_109SSU/LSU pseudoknot
IL_4V7C_229Isolated non-canonical cWW pair
IL_4V7C_110Single bulged U
IL_4V7C_111No text annotation
IL_4V7C_230No text annotation
IL_4V7C_112No text annotation
IL_4V7C_113Isolated non-canonical cWW pair
IL_4V7C_231Tandem non-canonical cWW pairs
IL_4V7C_114Tandem non-canonical cWW pairs
IL_4V7C_115No text annotation
IL_4V7C_116No text annotation
IL_4V7C_117Tandem non-canonical cWW pairs
IL_4V7C_118No text annotation
IL_4V7C_119Kink-turn
IL_4V7C_1208x7 Sarcin-Ricin; G-bulge
IL_4V7C_121Major groove platform; stack outside cWW
IL_4V7C_263C-loop
IL_4V7C_122No text annotation
IL_4V7C_123UAA/GAN
IL_4V7C_124Isolated cWH basepair
IL_4V7C_232No text annotation
IL_4V7C_125tSH-tHW-tHS
IL_4V7C_126No text annotation
IL_4V7C_127Isolated non-canonical cWW pair
IL_4V7C_128No text annotation
IL_4V7C_233No text annotation
IL_4V7C_129UAA/GAN
IL_4V7C_130No text annotation
IL_4V7C_264Tandem non-canonical cWW pairs
IL_4V7C_131tSH-tHW
IL_4V7C_132No text annotation
IL_4V7C_133Isolated non-canonical cWW pair
IL_4V7C_134Single bulged U
IL_4V7C_135No text annotation
IL_4V7C_234No text annotation
IL_4V7C_136No text annotation
IL_4V7C_265tSH-tHW-tHS
IL_4V7C_137No text annotation
IL_4V7C_138Single bulged A
IL_4V7C_139No text annotation
IL_4V7C_235No text annotation
IL_4V7C_140Isolated tWW turn
IL_4V7C_141Major groove platform; stack outside cWW
IL_4V7C_142tSH-tSH-tHH-tHS
IL_4V7C_1436x5 Sarcin-Ricin; G-bulge
IL_4V7C_144Triple sheared
IL_4V7C_236No text annotation
IL_4V7C_237No text annotation
IL_4V7C_145Single bulged A
IL_4V7C_146Kink-turn related
IL_4V7C_238No text annotation
IL_4V7C_147Minor groove platform, major groove intercalation
IL_4V7C_148No text annotation
IL_4V7C_266Major groove intercalation
IL_4V7C_149No text annotation
IL_4V7C_239No text annotation
IL_4V7C_267Major groove minor groove platform; mini C-loop
IL_4V7C_240No text annotation
IL_4V7C_150Isolated non-canonical cWW pair
IL_4V7C_151UAA/GAN related
IL_4V7C_152Bulged stacked bases
IL_4V7C_153No text annotation
IL_4V7C_154Isolated non-canonical cWW pair
IL_4V7C_155Major groove platform
IL_4V7C_156No text annotation
IL_4V7C_157No text annotation
IL_4V7C_241Tandem non-canonical cWW pairs
IL_4V7C_158Single bulged U
IL_4V7C_159Isolated non-canonical cWW pair
IL_4V7C_268Minor groove platform
IL_4V7C_160No text annotation
IL_4V7C_161Isolated tHS basepair with bulges
IL_4V7C_162Isolated non-canonical cWW pair
IL_4V7C_163Isolated cWH basepair
IL_4V7C_164Tandem non-canonical cWW pairs
IL_4V7C_269Other IL
IL_4V7C_165No text annotation
IL_4V7C_242No text annotation
IL_4V7C_166No text annotation
IL_4V7C_270No text annotation
IL_4V7C_167No text annotation
IL_4V7C_243Kink-turn
IL_4V7C_168Kink-turn related
IL_4V7C_271Kink-turn
IL_4V7C_169No text annotation
IL_4V7C_244No text annotation
IL_4V7C_170Isolated non-canonical cWW pair
IL_4V7C_171Isolated non-canonical cWW pair
IL_4V7C_172Single bulged U
IL_4V7C_173No text annotation
IL_4V7C_174Double sheared
IL_4V7C_175No text annotation
IL_4V7C_176Single stack bend
IL_4V7C_272No text annotation
IL_4V7C_245No text annotation
IL_4V7C_177Major groove platform
IL_4V7C_178No text annotation
IL_4V7C_273No text annotation
IL_4V7C_179Double sheared with non-canonical cWW
IL_4V7C_180Major groove platform
IL_4V7C_246Tandem non-canonical cWW pairs
IL_4V7C_181Isolated non-canonical cWW with bulges
IL_4V7C_182Multiple bulged bases
IL_4V7C_247No text annotation
IL_4V7C_183Major groove platform with intercalation
IL_4V7C_248No text annotation
IL_4V7C_184Isolated non-canonical cWW pair
IL_4V7C_185Single bulged A
IL_4V7C_186tSH-tHS-tHW
IL_4V7C_187Sarcin-Ricin target in LSU H95; G-bulge
IL_4V7C_188No text annotation
IL_4V7C_274C-loop
IL_4V7C_189UAA/GAN related, with intercalation
IL_4V7C_190Multiple bulged bases
IL_4V7C_191No text annotation
IL_4V7C_249No text annotation
IL_4V7C_275No text annotation
IL_4V7C_192No text annotation
IL_4V7C_193No text annotation
IL_4V7C_194No text annotation
IL_4V7C_195Single bulged C
IL_4V7C_250No text annotation
IL_4V7C_196Multiple bulged bases with non-canonical cWW
IL_4V7C_197tHS double platform
IL_4V7C_198Major groove intercalation
IL_4V7C_199No text annotation
IL_4V7C_276Major groove minor groove platform; mini C-loop
IL_4V7C_200No text annotation
IL_4V7C_277Symmetric double minor groove platform
IL_4V7C_201Bacterial 5S Loop E
IL_4V7C_251No text annotation

Valid loops

No loops found

Problematic loops

#loop idProblemSequence
J3_4V7C_018No text annotation
J3_4V7C_019No text annotation
J3_4V7C_039No text annotation
J3_4V7C_020No text annotation
J3_4V7C_040No text annotation
J3_4V7C_021No text annotation
J3_4V7C_001No text annotation
J3_4V7C_022No text annotation
J3_4V7C_023No text annotation
J3_4V7C_041No text annotation
J3_4V7C_002No text annotation
J3_4V7C_003No text annotation
J3_4V7C_042No text annotation
J3_4V7C_024No text annotation
J3_4V7C_004No text annotation
J3_4V7C_025No text annotation
J3_4V7C_043No text annotation
J3_4V7C_005No text annotation
J3_4V7C_006No text annotation
J3_4V7C_044No text annotation
J3_4V7C_026No text annotation
J3_4V7C_027No text annotation
J3_4V7C_028No text annotation
J3_4V7C_007No text annotation
J3_4V7C_045No text annotation
J3_4V7C_029No text annotation
J3_4V7C_008No text annotation
J3_4V7C_046No text annotation
J3_4V7C_047No text annotation
J3_4V7C_030No text annotation
J3_4V7C_009No text annotation
J3_4V7C_031No text annotation
J3_4V7C_048No text annotation
J3_4V7C_010No text annotation
J3_4V7C_011No text annotation
J3_4V7C_012No text annotation
J3_4V7C_049No text annotation
J3_4V7C_032No text annotation
J3_4V7C_033No text annotation
J3_4V7C_013Kink-turn 3-way junction
J3_4V7C_034No text annotation
J3_4V7C_035No text annotation
J3_4V7C_014No text annotation
J3_4V7C_050No text annotation
J3_4V7C_015No text annotation
J3_4V7C_036No text annotation
J3_4V7C_016No text annotation
J3_4V7C_037No text annotation
J3_4V7C_051No text annotation
J3_4V7C_017No text annotation
J3_4V7C_052No text annotation
J3_4V7C_038No text annotation
J4_4V7C_001No text annotation
J4_4V7C_016No text annotation
J4_4V7C_002No text annotation
J4_4V7C_017No text annotation
J4_4V7C_018No text annotation
J4_4V7C_003No text annotation
J4_4V7C_004No text annotation
J4_4V7C_019No text annotation
J4_4V7C_020tRNA junction
J4_4V7C_005No text annotation
J4_4V7C_006No text annotation
J4_4V7C_021No text annotation
J4_4V7C_007No text annotation
J4_4V7C_008No text annotation
J4_4V7C_022No text annotation
J4_4V7C_009No text annotation
J4_4V7C_023No text annotation
J4_4V7C_010No text annotation
J4_4V7C_024No text annotation
J4_4V7C_011No text annotation
J4_4V7C_012No text annotation
J4_4V7C_025No text annotation
J4_4V7C_013No text annotation
J4_4V7C_026No text annotation
J4_4V7C_014No text annotation
J4_4V7C_015No text annotation
J4_4V7C_027No text annotation
J5_4V7C_009No text annotation
J5_4V7C_001No text annotation
J5_4V7C_010No text annotation
J5_4V7C_002No text annotation
J5_4V7C_003No text annotation
J5_4V7C_011No text annotation
J5_4V7C_004No text annotation
J5_4V7C_005No text annotation
J5_4V7C_006No text annotation
J5_4V7C_007No text annotation
J5_4V7C_012No text annotation
J5_4V7C_008No text annotation
J5_4V7C_013No text annotation
J7_4V7C_001No text annotation
J8_4V7C_001No text annotation
J9_4V7C_002No text annotation
J9_4V7C_001No text annotation

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