HL_4V7C_133

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

CUGAAUGGAAGG

Length

12 nucleotides

Bulged bases

4V7C|1|BA|A|2406

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7C_133 not in the Motif Atlas

Geometric match to HL_7VNV_002

Geometric discrepancy: 0.3387

The information below is about HL_7VNV_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_81376.2

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

42

Unit IDs

4V7C|1|BA|C|2403
4V7C|1|BA|U|2404
4V7C|1|BA|G|2405
4V7C|1|BA|A|2406
4V7C|1|BA|A|2407
4V7C|1|BA|U|2408
4V7C|1|BA|G|2409
4V7C|1|BA|G|2410
4V7C|1|BA|A|2411
4V7C|1|BA|A|2412
4V7C|1|BA|G|2413
4V7C|1|BA|G|2414

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L15