HL_4V7C_141

3D structure

PDB id

4V7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

4V7C|1|BA|U|1955

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7C_141 not in the Motif Atlas

Homologous match to HL_4WF9_046

Geometric discrepancy: 0.1506

The information below is about HL_4WF9_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61418.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

8

Unit IDs

4V7C|1|BA|G|1949
4V7C|1|BA|G|1950
4V7C|1|BA|U|1951
4V7C|1|BA|A|1952
4V7C|1|BA|A|1953
4V7C|1|BA|G|1954
4V7C|1|BA|U|1955
4V7C|1|BA|U|1956
4V7C|1|BA|C|1957

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BM

50S ribosomal protein L14