HL_4V7D_004

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

4V7D|1|AA|U|138, 4V7D|1|AA|U|139

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_004 not in the Motif Atlas

Homologous match to HL_5J7L_137

Geometric discrepancy: 0.2067

The information below is about HL_5J7L_137

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32392.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

4V7D|1|AA|U|137
4V7D|1|AA|U|138
4V7D|1|AA|U|139
4V7D|1|AA|C|140
4V7D|1|AA|G|141
4V7D|1|AA|A|142

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AW

50S ribosomal protein L23