Valid loops

No loops found

Problematic loops

#loop idProblemSequence
HL_4V7D_001No text annotation
HL_4V7D_002No text annotation
HL_4V7D_003No text annotation
HL_4V7D_004No text annotation
HL_4V7D_005No text annotation
HL_4V7D_110No text annotation
HL_4V7D_006No text annotation
HL_4V7D_007No text annotation
HL_4V7D_111No text annotation
HL_4V7D_008No text annotation
HL_4V7D_009T-loop with 2 stacked bulged bases
HL_4V7D_010No text annotation
HL_4V7D_011T-loop with unstacked turn
HL_4V7D_012No text annotation
HL_4V7D_135No text annotation
HL_4V7D_013Pseudoknot geometry
HL_4V7D_014GNRA
HL_4V7D_015GNRA
HL_4V7D_016No text annotation
HL_4V7D_017T-loop with 2 stacked bulged bases
HL_4V7D_018No text annotation
HL_4V7D_019GNRA
HL_4V7D_020No text annotation
HL_4V7D_021GNRA wlth tandem sheared
HL_4V7D_022No text annotation
HL_4V7D_023No text annotation
HL_4V7D_024No text annotation
HL_4V7D_112No text annotation
HL_4V7D_025No text annotation
HL_4V7D_026GNRA
HL_4V7D_027No text annotation
HL_4V7D_028No text annotation
HL_4V7D_113No text annotation
HL_4V7D_029GNRA wlth tandem sheared
HL_4V7D_114No text annotation
HL_4V7D_030No text annotation
HL_4V7D_136No text annotation
HL_4V7D_031GNRA
HL_4V7D_032T-loop with 2 stacked bulged bases
HL_4V7D_033Pseudoknot geometry with 3' bulge
HL_4V7D_034GNRA
HL_4V7D_035No text annotation
HL_4V7D_115UNCG variation
HL_4V7D_036Mini UNCG with extended bulge
HL_4V7D_116No text annotation
HL_4V7D_037Pseudoknot geometry with 3' bulge
HL_4V7D_038UNCG
HL_4V7D_039Mini UNCG
HL_4V7D_040No text annotation
HL_4V7D_041GNRA
HL_4V7D_042No text annotation
HL_4V7D_043No text annotation
HL_4V7D_044No text annotation
HL_4V7D_045No text annotation
HL_4V7D_046GNRA related
HL_4V7D_117No text annotation
HL_4V7D_047GNRA variation
HL_4V7D_048No text annotation
HL_4V7D_049No text annotation
HL_4V7D_137No text annotation
HL_4V7D_050No text annotation
HL_4V7D_051No text annotation
HL_4V7D_052No text annotation
HL_4V7D_053No text annotation
HL_4V7D_054No text annotation
HL_4V7D_118No text annotation
HL_4V7D_055No text annotation
HL_4V7D_056No text annotation
HL_4V7D_119Pseudoknot geometry
HL_4V7D_120GNRA with extra cWW
HL_4V7D_057GNRA
HL_4V7D_058GNRA
HL_4V7D_121tRNA anticodon loop
HL_4V7D_059No text annotation
HL_4V7D_122No text annotation
HL_4V7D_060No text annotation
HL_4V7D_123No text annotation
HL_4V7D_061GNRA variation
HL_4V7D_124No text annotation
HL_4V7D_062No text annotation
HL_4V7D_063GNRA
HL_4V7D_064GNRA
HL_4V7D_065Ribsomal LSU H95
HL_4V7D_066No text annotation
HL_4V7D_067UNCG variation
HL_4V7D_068No text annotation
HL_4V7D_069GNRA
HL_4V7D_070No text annotation
HL_4V7D_071Mini UNCG
HL_4V7D_072No text annotation
HL_4V7D_073No text annotation
HL_4V7D_125GNRA with extra near cWW
HL_4V7D_074GNRA
HL_4V7D_075GNRA
HL_4V7D_126No text annotation
HL_4V7D_076No text annotation
HL_4V7D_077GNRA related
HL_4V7D_078GNRA
HL_4V7D_127No text annotation
HL_4V7D_079No text annotation
HL_4V7D_128No text annotation
HL_4V7D_080UNCG
HL_4V7D_129tRNA anticodon loop
HL_4V7D_081GNRA
HL_4V7D_082UNCG
HL_4V7D_083No text annotation
HL_4V7D_138GNRA wlth extra near cWW
HL_4V7D_130No text annotation
HL_4V7D_084GNRA with extra near cWW
HL_4V7D_085GNRA-like with tWH
HL_4V7D_086No text annotation
HL_4V7D_087GNRA
HL_4V7D_088No text annotation
HL_4V7D_089No text annotation
HL_4V7D_090GNRA
HL_4V7D_091GNRA
HL_4V7D_092No text annotation
HL_4V7D_093GNRA
HL_4V7D_094No text annotation
HL_4V7D_095GNRA
HL_4V7D_131No text annotation
HL_4V7D_096T-loop related
HL_4V7D_132No text annotation
HL_4V7D_097No text annotation
HL_4V7D_098GNRA
HL_4V7D_099GNRA
HL_4V7D_100T-loop with 3 stacked bulged bases
HL_4V7D_101No text annotation
HL_4V7D_133No text annotation
HL_4V7D_102UNCG
HL_4V7D_103GNRA
HL_4V7D_104No text annotation
HL_4V7D_134No text annotation
HL_4V7D_139No text annotation
HL_4V7D_105tRNA anticodon loop
HL_4V7D_106T-loop with 2 stacked bulged bases
HL_4V7D_107No text annotation
HL_4V7D_108tRNA anticodon loop
HL_4V7D_109T-loop with 2 stacked bulged bases

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4V7D_0341/AA/994:996,
1/AA/1159:1160
Single bulged C
homologous
IL_7RQB_035
NA

Problematic loops

#loop idProblemSequence
IL_4V7D_001Triple sheared with non-canonical cWW
IL_4V7D_002Single bulged A
IL_4V7D_003Isolated non-canonical cWW pair
IL_4V7D_004Minor groove platform with extra cWW
IL_4V7D_250Minor groove platform
IL_4V7D_005No text annotation
IL_4V7D_006Single stack bend
IL_4V7D_0078x7 Sarcin-Ricin; G-bulge
IL_4V7D_0087x6 Sarcin-Ricin; G-bulge
IL_4V7D_009Isolated non-canonical cWW pair
IL_4V7D_010No text annotation
IL_4V7D_203No text annotation
IL_4V7D_011Isolated non-canonical cWW pair
IL_4V7D_012No text annotation
IL_4V7D_013No text annotation
IL_4V7D_014Double sheared
IL_4V7D_015Isolated non-canonical cWW pair
IL_4V7D_016No text annotation
IL_4V7D_017AAA cross-strand stack
IL_4V7D_018Isolated non-canonical cWW pair
IL_4V7D_019tHW-tHW cross-strand stack
IL_4V7D_020Single bulged A
IL_4V7D_021Single bulged G
IL_4V7D_022Triple sheared
IL_4V7D_204No text annotation
IL_4V7D_023Major groove platform
IL_4V7D_024Multiple bulged bases
IL_4V7D_02590 degree turn
IL_4V7D_205No text annotation
IL_4V7D_026Stack outside cWW
IL_4V7D_027Single stack bend
IL_4V7D_206No text annotation
IL_4V7D_0287x7 Sarcin-Ricin with intercalated A; G-bulge
IL_4V7D_251No text annotation
IL_4V7D_029Single bulged G
IL_4V7D_030No text annotation
IL_4V7D_207No text annotation
IL_4V7D_252No text annotation
IL_4V7D_031Isolated non-canonical cWW pair
IL_4V7D_208No text annotation
IL_4V7D_253Double sheared with non-canonical cWW
IL_4V7D_032No text annotation
IL_4V7D_033Isolated non-canonical cWW pair
IL_4V7D_035UAA/GAN
IL_4V7D_036SSU/LSU pseudoknot
IL_4V7D_209Isolated non-canonical cWW pair
IL_4V7D_037Single bulged U
IL_4V7D_038No text annotation
IL_4V7D_210No text annotation
IL_4V7D_039No text annotation
IL_4V7D_040Isolated non-canonical cWW pair
IL_4V7D_041Tandem non-canonical cWW pairs
IL_4V7D_042No text annotation
IL_4V7D_043No text annotation
IL_4V7D_044Tandem non-canonical cWW pairs
IL_4V7D_211Partly complementary
IL_4V7D_045No text annotation
IL_4V7D_046Kink-turn
IL_4V7D_0478x7 Sarcin-Ricin; G-bulge
IL_4V7D_048Major groove platform; stack outside cWW
IL_4V7D_254C-loop
IL_4V7D_049No text annotation
IL_4V7D_050UAA/GAN
IL_4V7D_051Isolated non-canonical cWW pair
IL_4V7D_212No text annotation
IL_4V7D_052tSH-tHW-tHS
IL_4V7D_053No text annotation
IL_4V7D_054Isolated non-canonical cWW pair
IL_4V7D_055No text annotation
IL_4V7D_213No text annotation
IL_4V7D_056UAA/GAN
IL_4V7D_057No text annotation
IL_4V7D_255Tandem non-canonical cWW pairs
IL_4V7D_058tSH-tHW
IL_4V7D_059No text annotation
IL_4V7D_060Single bulged U
IL_4V7D_061No text annotation
IL_4V7D_214No text annotation
IL_4V7D_062No text annotation
IL_4V7D_256tSH-tHW-tHS
IL_4V7D_063No text annotation
IL_4V7D_257180 degree turn
IL_4V7D_064Single bulged A
IL_4V7D_065No text annotation
IL_4V7D_215No text annotation
IL_4V7D_066Isolated tWW turn
IL_4V7D_067Major groove platform; stack outside cWW
IL_4V7D_068tSH-tSH-tHH-tHS
IL_4V7D_0696x5 Sarcin-Ricin; G-bulge
IL_4V7D_070Triple sheared
IL_4V7D_216No text annotation
IL_4V7D_071Single bulged A
IL_4V7D_072Kink-turn related
IL_4V7D_217No text annotation
IL_4V7D_073Minor groove platform, major groove intercalation
IL_4V7D_074No text annotation
IL_4V7D_258Major groove intercalation
IL_4V7D_075No text annotation
IL_4V7D_218No text annotation
IL_4V7D_259Major groove minor groove platform; mini C-loop
IL_4V7D_219No text annotation
IL_4V7D_076Isolated non-canonical cWW pair
IL_4V7D_077UAA/GAN related
IL_4V7D_078Bulged stacked bases
IL_4V7D_079No text annotation
IL_4V7D_080Isolated non-canonical cWW pair
IL_4V7D_081Major groove platform
IL_4V7D_082No text annotation
IL_4V7D_083No text annotation
IL_4V7D_220Tandem non-canonical cWW pairs
IL_4V7D_084Single bulged U
IL_4V7D_085Minor groove platform with extra cWW
IL_4V7D_260Minor groove platform
IL_4V7D_086No text annotation
IL_4V7D_087Isolated tHS basepair with bulges
IL_4V7D_088Isolated non-canonical cWW pair
IL_4V7D_089Tandem non-canonical cWW pairs
IL_4V7D_261No text annotation
IL_4V7D_090No text annotation
IL_4V7D_221No text annotation
IL_4V7D_091Tandem non-canonical cWW pairs
IL_4V7D_262No text annotation
IL_4V7D_092No text annotation
IL_4V7D_093No text annotation
IL_4V7D_263Kink-turn
IL_4V7D_222No text annotation
IL_4V7D_094No text annotation
IL_4V7D_264No text annotation
IL_4V7D_095No text annotation
IL_4V7D_223No text annotation
IL_4V7D_096Isolated non-canonical cWW pair
IL_4V7D_097Isolated non-canonical cWW pair
IL_4V7D_098Single bulged U
IL_4V7D_099No text annotation
IL_4V7D_100Double sheared
IL_4V7D_101No text annotation
IL_4V7D_102Single stack bend
IL_4V7D_103Major groove platform
IL_4V7D_224No text annotation
IL_4V7D_104No text annotation
IL_4V7D_265No text annotation
IL_4V7D_225No text annotation
IL_4V7D_105Double sheared with non-canonical cWW
IL_4V7D_106Major groove platform
IL_4V7D_226Tandem non-canonical cWW pairs
IL_4V7D_107Isolated non-canonical cWW with bulges
IL_4V7D_108Multiple bulged bases
IL_4V7D_227No text annotation
IL_4V7D_109Major groove platform with intercalation
IL_4V7D_228No text annotation
IL_4V7D_110Isolated non-canonical cWW pair
IL_4V7D_111Single bulged A
IL_4V7D_112tSH-tHS-tHW
IL_4V7D_113Sarcin-Ricin target in LSU H95; G-bulge
IL_4V7D_114No text annotation
IL_4V7D_266C-loop
IL_4V7D_115UAA/GAN related, with intercalation
IL_4V7D_116Multiple bulged bases
IL_4V7D_117UAA/GAN with extra cWW
IL_4V7D_229No text annotation
IL_4V7D_118No text annotation
IL_4V7D_119No text annotation
IL_4V7D_120No text annotation
IL_4V7D_121Major groove intercalation
IL_4V7D_230No text annotation
IL_4V7D_122Multiple bulged bases with non-canonical cWW
IL_4V7D_123tHS double platform
IL_4V7D_124Major groove intercalation
IL_4V7D_125No text annotation
IL_4V7D_267Major groove minor groove platform; mini C-loop
IL_4V7D_126No text annotation
IL_4V7D_127No text annotation
IL_4V7D_268Symmetric double minor groove platform
IL_4V7D_128Bacterial 5S Loop E
IL_4V7D_231No text annotation
IL_4V7D_129Isolated non-canonical cWW pair
IL_4V7D_130Single bulged G
IL_4V7D_131Isolated non-canonical cWW pair
IL_4V7D_232Single bulged A
IL_4V7D_132No text annotation
IL_4V7D_133Minor groove platform
IL_4V7D_134Multiple bulged bases
IL_4V7D_135Minor groove platform with extra cWW
IL_4V7D_136No text annotation
IL_4V7D_233No text annotation
IL_4V7D_137Major groove intercalation
IL_4V7D_138Tandem non-canonical cWW pairs
IL_4V7D_269Isolated non-canonical cWW pair
IL_4V7D_234No text annotation
IL_4V7D_270Minor groove platform related
IL_4V7D_139No text annotation
IL_4V7D_140Isolated cWH basepair
IL_4V7D_271No text annotation
IL_4V7D_235No text annotation
IL_4V7D_141No text annotation
IL_4V7D_142No text annotation
IL_4V7D_143Kink-turn with non-sequential stacking
IL_4V7D_236No text annotation
IL_4V7D_144No text annotation
IL_4V7D_272No text annotation
IL_4V7D_237No text annotation
IL_4V7D_145No text annotation
IL_4V7D_273C-loop
IL_4V7D_146C-loop
IL_4V7D_238Single bulged G
IL_4V7D_147Single bulged G, near cWW
IL_4V7D_148No text annotation
IL_4V7D_149tSH-tHW-tWW
IL_4V7D_150No text annotation
IL_4V7D_274No text annotation
IL_4V7D_239No text annotation
IL_4V7D_151Single stack bend
IL_4V7D_152Tandem non-canonical cWW pairs
IL_4V7D_153SSU/LSU pseudoknot
IL_4V7D_240No text annotation
IL_4V7D_154No text annotation
IL_4V7D_155tSH-tHW-tHS
IL_4V7D_156Major groove platform
IL_4V7D_241Major groove minor groove platform with extra cWW
IL_4V7D_157No text annotation
IL_4V7D_275Major groove minor groove platform; mini C-loop
IL_4V7D_158No text annotation
IL_4V7D_159Major groove platform; stack outside cWW
IL_4V7D_242No text annotation
IL_4V7D_160Single stack bend
IL_4V7D_243Partly complementary
IL_4V7D_161Tandem non-canonical cWW pairs
IL_4V7D_276Triple non-canonical cWW pairs
IL_4V7D_162No text annotation
IL_4V7D_277Kink-turn
IL_4V7D_163Left turn
IL_4V7D_164tSH-tHW-tHS
IL_4V7D_2788x6 Sarcin-Ricin with inserted Y; G-bulge
IL_4V7D_1659x7 Sarcin-Ricin with inserted C; G-bulge
IL_4V7D_279Single bulged A
IL_4V7D_166Single bulged G
IL_4V7D_167Isolated non-canonical cWW pair
IL_4V7D_168Minor groove platform
IL_4V7D_169Minor groove platform
IL_4V7D_244No text annotation
IL_4V7D_170Isolated non-canonical cWW pair
IL_4V7D_171No text annotation
IL_4V7D_172Single stack bend
IL_4V7D_173Isolated non-canonical cWW pair
IL_4V7D_174Single bulged U
IL_4V7D_175Tandem non-canonical cWW pairs
IL_4V7D_245Isolated cWS basepair
IL_4V7D_246No text annotation
IL_4V7D_247Minor groove platform with extra cWW
IL_4V7D_176Minor groove platform
IL_4V7D_177Single bulged A
IL_4V7D_178Isolated non-canonical cWW pair
IL_4V7D_179Isolated non-canonical cWW pair
IL_4V7D_180Isolated non-canonical cWW pair
IL_4V7D_280No text annotation
IL_4V7D_181No text annotation
IL_4V7D_182Minor groove platform
IL_4V7D_183No text annotation
IL_4V7D_184No text annotation
IL_4V7D_185180 degree turn
IL_4V7D_186Double sheared with non-canonical cWW
IL_4V7D_187No text annotation
IL_4V7D_188Isolated non-canonical cWW pair
IL_4V7D_189No text annotation
IL_4V7D_190No text annotation
IL_4V7D_191Isolated non-canonical cWW pair
IL_4V7D_192Decoding loop related
IL_4V7D_281Isolated non-canonical cWW pair
IL_4V7D_193Tandem non-canonical cWW pairs
IL_4V7D_248Double sheared
IL_4V7D_194No text annotation
IL_4V7D_195No text annotation
IL_4V7D_196Single bulged A
IL_4V7D_197No text annotation
IL_4V7D_249No text annotation
IL_4V7D_198No text annotation
IL_4V7D_199No text annotation
IL_4V7D_200Partly complementary
IL_4V7D_201Isolated non-canonical cWW pair
IL_4V7D_202Isolated non-canonical cWW pair

Valid loops

No loops found

Problematic loops

#loop idProblemSequence
J3_4V7D_017No text annotation
J3_4V7D_018No text annotation
J3_4V7D_041No text annotation
J3_4V7D_042No text annotation
J3_4V7D_019No text annotation
J3_4V7D_001No text annotation
J3_4V7D_043No text annotation
J3_4V7D_002No text annotation
J3_4V7D_020No text annotation
J3_4V7D_044No text annotation
J3_4V7D_003No text annotation
J3_4V7D_021No text annotation
J3_4V7D_004No text annotation
J3_4V7D_005No text annotation
J3_4V7D_045No text annotation
J3_4V7D_022No text annotation
J3_4V7D_023No text annotation
J3_4V7D_006Kink-turn 3-way junction
J3_4V7D_024No text annotation
J3_4V7D_025No text annotation
J3_4V7D_007No text annotation
J3_4V7D_046No text annotation
J3_4V7D_008No text annotation
J3_4V7D_026No text annotation
J3_4V7D_009No text annotation
J3_4V7D_027No text annotation
J3_4V7D_047No text annotation
J3_4V7D_010No text annotation
J3_4V7D_048No text annotation
J3_4V7D_028No text annotation
J3_4V7D_029No text annotation
J3_4V7D_030No text annotation
J3_4V7D_031No text annotation
J3_4V7D_049No text annotation
J3_4V7D_032No text annotation
J3_4V7D_050No text annotation
J3_4V7D_033No text annotation
J3_4V7D_034No text annotation
J3_4V7D_011No text annotation
J3_4V7D_035No text annotation
J3_4V7D_051No text annotation
J3_4V7D_012No text annotation
J3_4V7D_013No text annotation
J3_4V7D_052No text annotation
J3_4V7D_036No text annotation
J3_4V7D_014No text annotation
J3_4V7D_037No text annotation
J3_4V7D_053No text annotation
J3_4V7D_015No text annotation
J3_4V7D_038No text annotation
J3_4V7D_054No text annotation
J3_4V7D_039No text annotation
J3_4V7D_016No text annotation
J3_4V7D_055No text annotation
J3_4V7D_040No text annotation
J4_4V7D_001No text annotation
J4_4V7D_018No text annotation
J4_4V7D_002No text annotation
J4_4V7D_003No text annotation
J4_4V7D_019No text annotation
J4_4V7D_004No text annotation
J4_4V7D_020No text annotation
J4_4V7D_005No text annotation
J4_4V7D_021No text annotation
J4_4V7D_006No text annotation
J4_4V7D_022No text annotation
J4_4V7D_007No text annotation
J4_4V7D_008No text annotation
J4_4V7D_009No text annotation
J4_4V7D_023No text annotation
J4_4V7D_024No text annotation
J4_4V7D_010No text annotation
J4_4V7D_011No text annotation
J4_4V7D_025No text annotation
J4_4V7D_012No text annotation
J4_4V7D_026No text annotation
J4_4V7D_013No text annotation
J4_4V7D_027No text annotation
J4_4V7D_028No text annotation
J4_4V7D_014No text annotation
J4_4V7D_015No text annotation
J4_4V7D_029No text annotation
J4_4V7D_016No text annotation
J4_4V7D_030tRNA junction
J4_4V7D_017No text annotation
J5_4V7D_001No text annotation
J5_4V7D_002No text annotation
J5_4V7D_003No text annotation
J5_4V7D_004No text annotation
J5_4V7D_005No text annotation
J5_4V7D_009No text annotation
J5_4V7D_006No text annotation
J5_4V7D_010No text annotation
J5_4V7D_011No text annotation
J5_4V7D_007No text annotation
J5_4V7D_012No text annotation
J5_4V7D_008No text annotation
J6_4V7D_001No text annotation
J6_4V7D_002No text annotation
J7_4V7D_002No text annotation
J7_4V7D_001No text annotation
J8_4V7D_002No text annotation
J8_4V7D_001No text annotation
J9_4V7D_002No text annotation
J9_4V7D_001No text annotation

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