HL_4V7D_006

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

4V7D|1|AA|A|196

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_006 not in the Motif Atlas

Geometric match to HL_7RQB_006

Geometric discrepancy: 0.104

The information below is about HL_7RQB_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

4V7D|1|AA|G|194
4V7D|1|AA|A|195
4V7D|1|AA|A|196
4V7D|1|AA|A|197
4V7D|1|AA|C|198
4V7D|1|AA|A|199
4V7D|1|AA|U|200
4V7D|1|AA|C|201

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain A1

50S ribosomal protein L28

Chain AO

50S ribosomal protein L15

Chain BW

Transfer RNA; tRNA