HL_4V7D_014

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_014 not in the Motif Atlas

Homologous match to HL_4WF9_015

Geometric discrepancy: 0.1123

The information below is about HL_4WF9_015

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4V7D|1|AA|C|462
4V7D|1|AA|G|463
4V7D|1|AA|U|464
4V7D|1|AA|G|465
4V7D|1|AA|A|466
4V7D|1|AA|G|467

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain A6

50S ribosomal protein L34

Chain AF

50S ribosomal protein L4