HL_4V7D_017
3D structure
- PDB id
- 4V7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.6 Å
Loop
- Sequence
- UUUUGUAUAA
- Length
- 10 nucleotides
- Bulged bases
- 4V7D|1|AA|A|574
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7D_017 not in the Motif Atlas
- Geometric match to HL_5J7L_150
- Geometric discrepancy: 0.1685
- The information below is about HL_5J7L_150
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
4V7D|1|AA|U|566
4V7D|1|AA|U|567
4V7D|1|AA|U|568
4V7D|1|AA|U|569
4V7D|1|AA|G|570
4V7D|1|AA|U|571
4V7D|1|AA|A|572
4V7D|1|AA|U|573
4V7D|1|AA|A|574
4V7D|1|AA|A|575
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain A4
- 50S ribosomal protein L32
- Chain AE
- 50S ribosomal protein L3
- Chain AO
- 50S ribosomal protein L15
- Chain AT
- 50S ribosomal protein L20
- Chain AU
- 50S ribosomal protein L21
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