HL_4V7D_020

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

UUAACUG

Length

7 nucleotides

Bulged bases

4V7D|1|AA|U|646

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_020 not in the Motif Atlas

Homologous match to HL_5J7L_153

Geometric discrepancy: 0.1807

The information below is about HL_5J7L_153

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13529.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4V7D|1|AA|U|641
4V7D|1|AA|U|642
4V7D|1|AA|A|643
4V7D|1|AA|A|644
4V7D|1|AA|C|645
4V7D|1|AA|U|646
4V7D|1|AA|G|647

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain A5

50S ribosomal protein L33

Chain A7

50S ribosomal protein L35