3D structure

PDB id
4V7D (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)
Experimental method
ELECTRON MICROSCOPY
Resolution
7.6 Å

Loop

Sequence
UUUAGG
Length
6 nucleotides
Bulged bases
4V7D|1|AA|U|827, 4V7D|1|AA|G|830
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V7D_024 not in the Motif Atlas
Homologous match to HL_4WF9_025
Geometric discrepancy: 0.1618
The information below is about HL_4WF9_025
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_55195.3
Basepair signature
cWW-F
Number of instances in this motif group
6

Unit IDs

4V7D|1|AA|U|826
4V7D|1|AA|U|827
4V7D|1|AA|U|828
4V7D|1|AA|A|829
4V7D|1|AA|G|830
4V7D|1|AA|G|831

Current chains

Chain AA
23S ribosomal RNA

Nearby chains

Chain AO
50S ribosomal protein L15

Coloring options:


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