HL_4V7D_053

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

4V7D|1|AA|G|2250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_053 not in the Motif Atlas

Homologous match to HL_5J7L_186

Geometric discrepancy: 0.142

The information below is about HL_5J7L_186

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85367.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

4V7D|1|AA|C|2248
4V7D|1|AA|U|2249
4V7D|1|AA|G|2250
4V7D|1|AA|G|2251
4V7D|1|AA|G|2252
4V7D|1|AA|G|2253
4V7D|1|AA|C|2254
4V7D|1|AA|G|2255
4V7D|1|AA|G|2256

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AP

50S ribosomal protein L16

Chain AZ

50S ribosomal protein L27

Chain BV

Transfer RNA; tRNA