HL_4V7D_060

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_060 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.1799

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4V7D|1|AA|A|2471
4V7D|1|AA|G|2472
4V7D|1|AA|U|2473
4V7D|1|AA|U|2474
4V7D|1|AA|C|2475
4V7D|1|AA|A|2476
4V7D|1|AA|U|2477
4V7D|1|AA|A|2478
4V7D|1|AA|U|2479

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain A8

50S ribosomal protein L36

Chain AH

50S ribosomal protein L6

Chain AP

50S ribosomal protein L16

Chain BZ

Elongation Factor G