HL_4V7D_068

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GAAGACGAC

Length

9 nucleotides

Bulged bases

4V7D|1|AA|A|2820

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_068 not in the Motif Atlas

Geometric match to HL_5J7L_201

Geometric discrepancy: 0.1165

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4V7D|1|AA|G|2819
4V7D|1|AA|A|2820
4V7D|1|AA|A|2821
4V7D|1|AA|G|2822
4V7D|1|AA|A|2823
4V7D|1|AA|C|2824
4V7D|1|AA|G|2825
4V7D|1|AA|A|2826
4V7D|1|AA|C|2827

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AE

50S ribosomal protein L3

Chain AQ

50S ribosomal protein L17

Chain AS

50S ribosomal protein L19