HL_4V7D_116

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GGCAAAUCC

Length

9 nucleotides

Bulged bases

4V7D|1|AA|C|1493, 4V7D|1|AA|U|1497

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_116 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3189

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

4V7D|1|AA|G|1491
4V7D|1|AA|G|1492
4V7D|1|AA|C|1493
4V7D|1|AA|A|1494
4V7D|1|AA|A|1495
4V7D|1|AA|A|1496
4V7D|1|AA|U|1497
4V7D|1|AA|C|1498
4V7D|1|AA|C|1499

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AD

50S ribosomal protein L2