HL_4V7D_121

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

CUGAAUGGAAGG

Length

12 nucleotides

Bulged bases

4V7D|1|AA|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_121 not in the Motif Atlas

Geometric match to HL_7VNV_002

Geometric discrepancy: 0.3465

The information below is about HL_7VNV_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_06059.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

51

Unit IDs

4V7D|1|AA|C|2403
4V7D|1|AA|U|2404
4V7D|1|AA|G|2405
4V7D|1|AA|A|2406
4V7D|1|AA|A|2407
4V7D|1|AA|U|2408
4V7D|1|AA|G|2409
4V7D|1|AA|G|2410
4V7D|1|AA|A|2411
4V7D|1|AA|A|2412
4V7D|1|AA|G|2413
4V7D|1|AA|G|2414

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AO

50S ribosomal protein L15