HL_4V7D_138

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

4V7D|1|BA|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7D_138 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.229

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4V7D|1|BA|G|462
4V7D|1|BA|U|463
4V7D|1|BA|U|464
4V7D|1|BA|A|465
4V7D|1|BA|A|466
4V7D|1|BA|U|467
4V7D|1|BA|A|468
4V7D|1|BA|C|469
4V7D|1|BA|C|470

Current chains

Chain BA

16S ribosomal RNA

Nearby chains