HL_4V7E_017

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GGUUCUGAAAC

Length

11 nucleotides

Bulged bases

4V7E|1|Aa|C|693, 4V7E|1|Aa|G|695

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Aa|G|689
4V7E|1|Aa|G|690
4V7E|1|Aa|U|691
4V7E|1|Aa|U|692
4V7E|1|Aa|C|693
4V7E|1|Aa|U|694
4V7E|1|Aa|G|695
4V7E|1|Aa|A|696
4V7E|1|Aa|A|697
4V7E|1|Aa|A|698
4V7E|1|Aa|C|699

Current chains

Chain Aa

60S ribosomal RNA

Nearby chains

Chain Ac

5.8S ribosomal RNA; 5.8S rRNA

Chain CC

60S ribosomal protein L4

Chain CL

60S ribosomal protein L13E

Chain CY

60S ribosomal protein L24