4V7E Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4V7E_001 | No text annotation | ||
| HL_4V7E_002 | No text annotation | ||
| HL_4V7E_003 | No text annotation | ||
| HL_4V7E_004 | No text annotation | ||
| HL_4V7E_005 | T-loop with 2 stacked bulged bases | ||
| HL_4V7E_006 | No text annotation | ||
| HL_4V7E_007 | T-loop with unstacked turn | ||
| HL_4V7E_008 | No text annotation | ||
| HL_4V7E_009 | Pseudoknot geometry | ||
| HL_4V7E_010 | GNRA | ||
| HL_4V7E_011 | GNRA | ||
| HL_4V7E_012 | No text annotation | ||
| HL_4V7E_013 | GNRA | ||
| HL_4V7E_014 | GNRA | ||
| HL_4V7E_015 | No text annotation | ||
| HL_4V7E_016 | T-loop with 2 stacked bulged bases | ||
| HL_4V7E_017 | No text annotation | ||
| HL_4V7E_018 | GNRA with extra cWW | ||
| HL_4V7E_019 | GNRA | ||
| HL_4V7E_020 | No text annotation | ||
| HL_4V7E_021 | GNRA | ||
| HL_4V7E_022 | No text annotation | ||
| HL_4V7E_023 | No text annotation | ||
| HL_4V7E_024 | Externally structured | ||
| HL_4V7E_025 | GNRA | ||
| HL_4V7E_026 | No text annotation | ||
| HL_4V7E_027 | GNRA | ||
| HL_4V7E_028 | No text annotation | ||
| HL_4V7E_029 | No text annotation | ||
| HL_4V7E_030 | No text annotation | ||
| HL_4V7E_031 | No text annotation | ||
| HL_4V7E_118 | No text annotation | ||
| HL_4V7E_032 | GNRA | ||
| HL_4V7E_033 | T-loop with 2 stacked bulged bases | ||
| HL_4V7E_034 | No text annotation | ||
| HL_4V7E_119 | Pseudoknot geometry with 3' bulge | ||
| HL_4V7E_035 | No text annotation | ||
| HL_4V7E_134 | GNRA variation | ||
| HL_4V7E_036 | No text annotation | ||
| HL_4V7E_037 | No text annotation | ||
| HL_4V7E_135 | No text annotation | ||
| HL_4V7E_038 | GNRA | ||
| HL_4V7E_039 | No text annotation | ||
| HL_4V7E_120 | No text annotation | ||
| HL_4V7E_040 | No text annotation | ||
| HL_4V7E_041 | No text annotation | ||
| HL_4V7E_042 | No text annotation | ||
| HL_4V7E_043 | GNRA | ||
| HL_4V7E_044 | UNCG | ||
| HL_4V7E_045 | UNCG variation | ||
| HL_4V7E_046 | No text annotation | ||
| HL_4V7E_047 | No text annotation | ||
| HL_4V7E_048 | GNRA | ||
| HL_4V7E_049 | GNRA | ||
| HL_4V7E_050 | No text annotation | ||
| HL_4V7E_051 | No text annotation | ||
| HL_4V7E_052 | No text annotation | ||
| HL_4V7E_053 | No text annotation | ||
| HL_4V7E_054 | No text annotation | ||
| HL_4V7E_055 | No text annotation | ||
| HL_4V7E_121 | No text annotation | ||
| HL_4V7E_122 | No text annotation | ||
| HL_4V7E_056 | No text annotation | ||
| HL_4V7E_057 | No text annotation | ||
| HL_4V7E_058 | No text annotation | ||
| HL_4V7E_059 | Pseudoknot geometry | ||
| HL_4V7E_060 | No text annotation | ||
| HL_4V7E_061 | GNRA | ||
| HL_4V7E_062 | Pseudoknot geometry | ||
| HL_4V7E_063 | No text annotation | ||
| HL_4V7E_064 | No text annotation | ||
| HL_4V7E_065 | No text annotation | ||
| HL_4V7E_066 | GNRA | ||
| HL_4V7E_067 | GNRA | ||
| HL_4V7E_068 | Ribsomal LSU H95 | ||
| HL_4V7E_069 | No text annotation | ||
| HL_4V7E_070 | Mini UNCG | ||
| HL_4V7E_071 | No text annotation | ||
| HL_4V7E_072 | No text annotation | ||
| HL_4V7E_073 | Mini UNCG | ||
| HL_4V7E_074 | No text annotation | ||
| HL_4V7E_075 | GNRA | ||
| HL_4V7E_076 | Pseudoknot with intercalation | ||
| HL_4V7E_123 | No text annotation | ||
| HL_4V7E_077 | GNRA variation | ||
| HL_4V7E_078 | No text annotation | ||
| HL_4V7E_079 | No text annotation | ||
| HL_4V7E_080 | No text annotation | ||
| HL_4V7E_081 | No text annotation | ||
| HL_4V7E_082 | GNRA | ||
| HL_4V7E_083 | No text annotation | ||
| HL_4V7E_124 | No text annotation | ||
| HL_4V7E_125 | No text annotation | ||
| HL_4V7E_084 | No text annotation | ||
| HL_4V7E_126 | No text annotation | ||
| HL_4V7E_085 | No text annotation | ||
| HL_4V7E_086 | GNRA related | ||
| HL_4V7E_087 | No text annotation | ||
| HL_4V7E_127 | No text annotation | ||
| HL_4V7E_088 | No text annotation | ||
| HL_4V7E_089 | UNCG | ||
| HL_4V7E_090 | No text annotation | ||
| HL_4V7E_128 | No text annotation | ||
| HL_4V7E_091 | Mini UNCG | ||
| HL_4V7E_092 | No text annotation | ||
| HL_4V7E_129 | No text annotation | ||
| HL_4V7E_136 | No text annotation | ||
| HL_4V7E_093 | GNRA variation | ||
| HL_4V7E_094 | No text annotation | ||
| HL_4V7E_130 | No text annotation | ||
| HL_4V7E_095 | No text annotation | ||
| HL_4V7E_096 | No text annotation | ||
| HL_4V7E_097 | No text annotation | ||
| HL_4V7E_131 | No text annotation | ||
| HL_4V7E_132 | No text annotation | ||
| HL_4V7E_098 | No text annotation | ||
| HL_4V7E_099 | GNRA | ||
| HL_4V7E_133 | No text annotation | ||
| HL_4V7E_100 | No text annotation | ||
| HL_4V7E_101 | No text annotation | ||
| HL_4V7E_102 | GNRA | ||
| HL_4V7E_103 | GNRA | ||
| HL_4V7E_104 | No text annotation | ||
| HL_4V7E_105 | Anticodon loop related | ||
| HL_4V7E_106 | GNRA | ||
| HL_4V7E_107 | No text annotation | ||
| HL_4V7E_108 | No text annotation | ||
| HL_4V7E_109 | GNRA | ||
| HL_4V7E_110 | GNRA | ||
| HL_4V7E_111 | No text annotation | ||
| HL_4V7E_112 | No text annotation | ||
| HL_4V7E_113 | Mini UNCG | ||
| HL_4V7E_114 | GNRA variation | ||
| HL_4V7E_115 | No text annotation | ||
| HL_4V7E_116 | tRNA anticodon loop | ||
| HL_4V7E_117 | T-loop with 2 stacked bulged bases |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4V7E_276 | 1/Aa/2464:2468, 1/Aa/2479:2493 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4V7E_001 | No text annotation | ||
| IL_4V7E_002 | tSH-tHW-tHH-tHS | ||
| IL_4V7E_003 | 9x8 Sarcin-Ricin; G-bulge | ||
| IL_4V7E_004 | No text annotation | ||
| IL_4V7E_260 | Single stack bend | ||
| IL_4V7E_005 | No text annotation | ||
| IL_4V7E_297 | Single stack bend | ||
| IL_4V7E_006 | No text annotation | ||
| IL_4V7E_261 | No text annotation | ||
| IL_4V7E_007 | No text annotation | ||
| IL_4V7E_008 | Isolated non-canonical cWW pair | ||
| IL_4V7E_262 | No text annotation | ||
| IL_4V7E_009 | Major groove platform with extra pair | ||
| IL_4V7E_010 | Single bulged U | ||
| IL_4V7E_011 | Single bulged A | ||
| IL_4V7E_012 | No text annotation | ||
| IL_4V7E_013 | Triple sheared with non-canonical cWW | ||
| IL_4V7E_014 | Isolated non-canonical cWW pair | ||
| IL_4V7E_263 | No text annotation | ||
| IL_4V7E_015 | Single stack bend | ||
| IL_4V7E_016 | Isolated non-canonical cWW pair | ||
| IL_4V7E_017 | Single stack bend | ||
| IL_4V7E_018 | Partly complementary | ||
| IL_4V7E_019 | Major groove platform | ||
| IL_4V7E_020 | No text annotation | ||
| IL_4V7E_021 | No text annotation | ||
| IL_4V7E_022 | Isolated non-canonical cWW pair | ||
| IL_4V7E_264 | No text annotation | ||
| IL_4V7E_023 | No text annotation | ||
| IL_4V7E_024 | Isolated non-canonical cWW pair | ||
| IL_4V7E_025 | No text annotation | ||
| IL_4V7E_026 | No text annotation | ||
| IL_4V7E_027 | UAA/GAN variation | ||
| IL_4V7E_028 | Single bulged A | ||
| IL_4V7E_029 | Single bulged U | ||
| IL_4V7E_030 | No text annotation | ||
| IL_4V7E_031 | Isolated non-canonical cWW pair | ||
| IL_4V7E_032 | tHW-tHW cross-strand stack | ||
| IL_4V7E_033 | No text annotation | ||
| IL_4V7E_034 | Major groove platform with extra cWW | ||
| IL_4V7E_035 | Single bulged U | ||
| IL_4V7E_036 | Multiple bulged bases | ||
| IL_4V7E_037 | Isolated non-canonical cWW pair | ||
| IL_4V7E_038 | No text annotation | ||
| IL_4V7E_298 | Single stack bend | ||
| IL_4V7E_039 | Isolated non-canonical cWW pair | ||
| IL_4V7E_040 | No text annotation | ||
| IL_4V7E_041 | Single bulged G | ||
| IL_4V7E_042 | 7x7 Sarcin-Ricin with intercalated A; G-bulge | ||
| IL_4V7E_043 | Minor groove platform | ||
| IL_4V7E_044 | C-loop | ||
| IL_4V7E_045 | No text annotation | ||
| IL_4V7E_265 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_046 | Isolated non-canonical cWW pair | ||
| IL_4V7E_266 | No text annotation | ||
| IL_4V7E_047 | No text annotation | ||
| IL_4V7E_048 | Isolated non-canonical cWW pair | ||
| IL_4V7E_049 | No text annotation | ||
| IL_4V7E_050 | Single bulged G | ||
| IL_4V7E_051 | Isolated non-canonical cWW pair | ||
| IL_4V7E_052 | No text annotation | ||
| IL_4V7E_053 | UAA/GAN | ||
| IL_4V7E_054 | SSU/LSU pseudoknot | ||
| IL_4V7E_055 | Single bulged U | ||
| IL_4V7E_056 | No text annotation | ||
| IL_4V7E_057 | No text annotation | ||
| IL_4V7E_058 | Single bulged U | ||
| IL_4V7E_059 | Isolated cWH basepair | ||
| IL_4V7E_299 | Kink-turn | ||
| IL_4V7E_060 | No text annotation | ||
| IL_4V7E_061 | No text annotation | ||
| IL_4V7E_062 | Isolated non-canonical cWW pair | ||
| IL_4V7E_063 | Isolated cWS basepair | ||
| IL_4V7E_064 | No text annotation | ||
| IL_4V7E_065 | No text annotation | ||
| IL_4V7E_066 | Single bulged A | ||
| IL_4V7E_067 | No text annotation | ||
| IL_4V7E_068 | No text annotation | ||
| IL_4V7E_069 | UAA/GAN | ||
| IL_4V7E_070 | Single stack bend | ||
| IL_4V7E_071 | Other IL | ||
| IL_4V7E_072 | Multiple bulged bases with near cWW | ||
| IL_4V7E_073 | No text annotation | ||
| IL_4V7E_074 | Triple sheared | ||
| IL_4V7E_267 | No text annotation | ||
| IL_4V7E_075 | Isolated non-canonical cWW pair | ||
| IL_4V7E_076 | Single bulged C | ||
| IL_4V7E_300 | No text annotation | ||
| IL_4V7E_268 | No text annotation | ||
| IL_4V7E_077 | Single stack bend | ||
| IL_4V7E_078 | Self complementary | ||
| IL_4V7E_079 | Isolated non-canonical cWW pair | ||
| IL_4V7E_080 | No text annotation | ||
| IL_4V7E_081 | No text annotation | ||
| IL_4V7E_082 | Kink-turn | ||
| IL_4V7E_083 | No text annotation | ||
| IL_4V7E_084 | No text annotation | ||
| IL_4V7E_085 | Major groove platform; stack outside cWW | ||
| IL_4V7E_269 | No text annotation | ||
| IL_4V7E_086 | Intercalated tWH | ||
| IL_4V7E_087 | No text annotation | ||
| IL_4V7E_088 | Isolated non-canonical cWW pair | ||
| IL_4V7E_270 | No text annotation | ||
| IL_4V7E_089 | No text annotation | ||
| IL_4V7E_090 | No text annotation | ||
| IL_4V7E_091 | No text annotation | ||
| IL_4V7E_092 | Double sheared | ||
| IL_4V7E_093 | No text annotation | ||
| IL_4V7E_094 | Single stack bend | ||
| IL_4V7E_095 | Single stack bend | ||
| IL_4V7E_096 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_271 | Triple non-canonical cWW pairs | ||
| IL_4V7E_301 | Isolated tHS basepair with bulges | ||
| IL_4V7E_097 | Double sheared | ||
| IL_4V7E_098 | Single bulged A | ||
| IL_4V7E_099 | No text annotation | ||
| IL_4V7E_100 | Isolated non-canonical cWW pair | ||
| IL_4V7E_272 | No text annotation | ||
| IL_4V7E_101 | No text annotation | ||
| IL_4V7E_102 | Major groove intercalation | ||
| IL_4V7E_103 | Single bulged U | ||
| IL_4V7E_273 | No text annotation | ||
| IL_4V7E_104 | Isolated non-canonical cWW with bulges | ||
| IL_4V7E_105 | No text annotation | ||
| IL_4V7E_106 | No text annotation | ||
| IL_4V7E_107 | No text annotation | ||
| IL_4V7E_108 | Major groove platform with extra pair | ||
| IL_4V7E_109 | Major groove platform with intercalation | ||
| IL_4V7E_110 | Single bulged U | ||
| IL_4V7E_111 | Minor groove platform | ||
| IL_4V7E_112 | Isolated tHS basepair with bulges | ||
| IL_4V7E_113 | Isolated non-canonical cWW pair | ||
| IL_4V7E_114 | Isolated non-canonical cWW pair | ||
| IL_4V7E_115 | No text annotation | ||
| IL_4V7E_274 | No text annotation | ||
| IL_4V7E_302 | No text annotation | ||
| IL_4V7E_116 | Isolated near basepair | ||
| IL_4V7E_303 | No text annotation | ||
| IL_4V7E_117 | No text annotation | ||
| IL_4V7E_275 | No text annotation | ||
| IL_4V7E_118 | Isolated non-canonical cWW pair | ||
| IL_4V7E_119 | No text annotation | ||
| IL_4V7E_120 | No text annotation | ||
| IL_4V7E_121 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_277 | Isolated non-canonical cWW pair | ||
| IL_4V7E_122 | No text annotation | ||
| IL_4V7E_123 | Major groove platform | ||
| IL_4V7E_124 | Isolated non-canonical cWW pair | ||
| IL_4V7E_125 | Major groove platform | ||
| IL_4V7E_126 | Major groove minor groove platform with extra cWW | ||
| IL_4V7E_127 | No text annotation | ||
| IL_4V7E_128 | Major groove platform | ||
| IL_4V7E_129 | No text annotation | ||
| IL_4V7E_130 | Multiple bulged bases | ||
| IL_4V7E_131 | No text annotation | ||
| IL_4V7E_132 | Isolated non-canonical cWW pair | ||
| IL_4V7E_133 | Isolated non-canonical cWW pair | ||
| IL_4V7E_134 | No text annotation | ||
| IL_4V7E_135 | Single bulged A | ||
| IL_4V7E_136 | Double sheared | ||
| IL_4V7E_137 | Isolated non-canonical cWW pair | ||
| IL_4V7E_138 | Isolated non-canonical cWW pair | ||
| IL_4V7E_139 | 8x7 Sarcin-Ricin; G-bulge | ||
| IL_4V7E_140 | Major groove minor groove platform with tHH | ||
| IL_4V7E_141 | UAA/GAN related | ||
| IL_4V7E_142 | Multiple bulged bases | ||
| IL_4V7E_143 | UAA/GAN | ||
| IL_4V7E_144 | Isolated non-canonical cWW pair | ||
| IL_4V7E_145 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_146 | No text annotation | ||
| IL_4V7E_147 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_148 | No text annotation | ||
| IL_4V7E_149 | Single stack bend | ||
| IL_4V7E_278 | No text annotation | ||
| IL_4V7E_150 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_304 | No text annotation | ||
| IL_4V7E_151 | No text annotation | ||
| IL_4V7E_152 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_305 | No text annotation | ||
| IL_4V7E_153 | Isolated non-canonical cWW with bulges | ||
| IL_4V7E_154 | Isolated non-canonical cWW pair | ||
| IL_4V7E_155 | No text annotation | ||
| IL_4V7E_156 | Single bulged U | ||
| IL_4V7E_157 | Double sheared; A in syn | ||
| IL_4V7E_158 | Isolated cWH basepair | ||
| IL_4V7E_159 | Multiple bulged bases | ||
| IL_4V7E_160 | Single bulged A | ||
| IL_4V7E_161 | No text annotation | ||
| IL_4V7E_162 | Minor groove platform | ||
| IL_4V7E_163 | Symmetric double minor groove platform | ||
| IL_4V7E_164 | No text annotation | ||
| IL_4V7E_165 | Isolated non-canonical cWW pair | ||
| IL_4V7E_166 | Isolated non-canonical cWW pair | ||
| IL_4V7E_167 | Isolated cWH basepair | ||
| IL_4V7E_279 | Single bulged U | ||
| IL_4V7E_168 | Isolated non-canonical cWW pair | ||
| IL_4V7E_169 | Single bulged C | ||
| IL_4V7E_170 | Kink-turn related | ||
| IL_4V7E_171 | No text annotation | ||
| IL_4V7E_172 | Single bulged C | ||
| IL_4V7E_173 | Isolated non-canonical cWW pair | ||
| IL_4V7E_174 | Double sheared with non-canonical cWW | ||
| IL_4V7E_175 | No text annotation | ||
| IL_4V7E_176 | Minor groove platform | ||
| IL_4V7E_280 | No text annotation | ||
| IL_4V7E_177 | No text annotation | ||
| IL_4V7E_178 | Tandem non-canonical cWW pairs with near WC pairs | ||
| IL_4V7E_179 | No text annotation | ||
| IL_4V7E_180 | tWH-tWH-tHW-tHW | ||
| IL_4V7E_181 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_182 | Isolated near basepair | ||
| IL_4V7E_281 | Double sheared | ||
| IL_4V7E_183 | Major groove minor groove platform with extra cWW | ||
| IL_4V7E_184 | No text annotation | ||
| IL_4V7E_282 | Single stack bend | ||
| IL_4V7E_185 | Isolated cWH basepair | ||
| IL_4V7E_186 | Kink-turn with non-sequential stacking | ||
| IL_4V7E_283 | No text annotation | ||
| IL_4V7E_187 | Isolated non-canonical cWW pair | ||
| IL_4V7E_188 | No text annotation | ||
| IL_4V7E_284 | No text annotation | ||
| IL_4V7E_189 | No text annotation | ||
| IL_4V7E_190 | Isolated cWH basepair | ||
| IL_4V7E_191 | Isolated near basepair | ||
| IL_4V7E_306 | Single bulged U | ||
| IL_4V7E_192 | C-loop with extra cWW pair | ||
| IL_4V7E_193 | No text annotation | ||
| IL_4V7E_307 | Minor groove platform | ||
| IL_4V7E_194 | Isolated cWH basepair | ||
| IL_4V7E_195 | SSU/LSU pseudoknot | ||
| IL_4V7E_196 | Single bulged U | ||
| IL_4V7E_197 | Kink-turn related | ||
| IL_4V7E_198 | Isolated non-canonical cWW pair | ||
| IL_4V7E_199 | No text annotation | ||
| IL_4V7E_200 | Isolated non-canonical cWW pair | ||
| IL_4V7E_201 | tSH-tHW-tHS | ||
| IL_4V7E_202 | Isolated non-canonical cWW pair | ||
| IL_4V7E_203 | Major groove minor groove platform; mini C-loop | ||
| IL_4V7E_204 | Isolated non-canonical cWW pair | ||
| IL_4V7E_285 | No text annotation | ||
| IL_4V7E_205 | No text annotation | ||
| IL_4V7E_206 | No text annotation | ||
| IL_4V7E_207 | Isolated cWH basepair | ||
| IL_4V7E_208 | Major groove platform; stack outside cWW | ||
| IL_4V7E_209 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_286 | Isolated non-canonical cWW pair | ||
| IL_4V7E_210 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_211 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_212 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_213 | Kink-turn related | ||
| IL_4V7E_214 | Isolated cWS basepair | ||
| IL_4V7E_287 | No text annotation | ||
| IL_4V7E_215 | Other IL | ||
| IL_4V7E_288 | tSH-tHW-tHS | ||
| IL_4V7E_216 | No text annotation | ||
| IL_4V7E_217 | No text annotation | ||
| IL_4V7E_218 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_219 | Isolated non-canonical cWW pair | ||
| IL_4V7E_220 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | ||
| IL_4V7E_221 | Single bulged A | ||
| IL_4V7E_308 | No text annotation | ||
| IL_4V7E_222 | Isolated non-canonical cWW pair | ||
| IL_4V7E_223 | Isolated non-canonical cWW pair | ||
| IL_4V7E_224 | No text annotation | ||
| IL_4V7E_225 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_309 | Isolated non-canonical cWW pair | ||
| IL_4V7E_226 | Major groove platform | ||
| IL_4V7E_227 | Isolated non-canonical cWW pair | ||
| IL_4V7E_228 | No text annotation | ||
| IL_4V7E_289 | No text annotation | ||
| IL_4V7E_229 | No text annotation | ||
| IL_4V7E_230 | No text annotation | ||
| IL_4V7E_231 | Single bulged U | ||
| IL_4V7E_232 | Isolated cWS basepair | ||
| IL_4V7E_290 | No text annotation | ||
| IL_4V7E_233 | Minor groove platform with extra cWW | ||
| IL_4V7E_234 | Single bulged A | ||
| IL_4V7E_235 | Isolated cWH basepair | ||
| IL_4V7E_236 | Minor groove platform | ||
| IL_4V7E_291 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_237 | Isolated non-canonical cWW pair | ||
| IL_4V7E_238 | Minor groove platform | ||
| IL_4V7E_239 | Partly complementary | ||
| IL_4V7E_240 | No text annotation | ||
| IL_4V7E_241 | No text annotation | ||
| IL_4V7E_242 | Isolated non-canonical cWW pair | ||
| IL_4V7E_292 | No text annotation | ||
| IL_4V7E_243 | No text annotation | ||
| IL_4V7E_244 | Isolated non-canonical cWW pair | ||
| IL_4V7E_245 | No text annotation | ||
| IL_4V7E_246 | No text annotation | ||
| IL_4V7E_247 | No text annotation | ||
| IL_4V7E_293 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_248 | Isolated cWH basepair | ||
| IL_4V7E_249 | No text annotation | ||
| IL_4V7E_250 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_294 | Isolated non-canonical cWW pair | ||
| IL_4V7E_251 | Double sheared | ||
| IL_4V7E_295 | No text annotation | ||
| IL_4V7E_252 | Single bulged U | ||
| IL_4V7E_253 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_310 | Double sheared | ||
| IL_4V7E_296 | Double sheared with non-canonical cWW | ||
| IL_4V7E_254 | tSH-tHW-tHS-cWW | ||
| IL_4V7E_255 | Tandem non-canonical cWW pairs | ||
| IL_4V7E_256 | Triple sheared | ||
| IL_4V7E_257 | No text annotation | ||
| IL_4V7E_258 | Single stack bend | ||
| IL_4V7E_259 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_4V7E_001 | No text annotation | ||
| J3_4V7E_022 | No text annotation | ||
| J3_4V7E_023 | No text annotation | ||
| J3_4V7E_024 | No text annotation | ||
| J3_4V7E_025 | No text annotation | ||
| J3_4V7E_047 | No text annotation | ||
| J3_4V7E_026 | No text annotation | ||
| J3_4V7E_002 | No text annotation | ||
| J3_4V7E_027 | No text annotation | ||
| J3_4V7E_048 | No text annotation | ||
| J3_4V7E_028 | No text annotation | ||
| J3_4V7E_003 | No text annotation | ||
| J3_4V7E_004 | No text annotation | ||
| J3_4V7E_029 | No text annotation | ||
| J3_4V7E_005 | No text annotation | ||
| J3_4V7E_006 | No text annotation | ||
| J3_4V7E_007 | No text annotation | ||
| J3_4V7E_030 | No text annotation | ||
| J3_4V7E_031 | No text annotation | ||
| J3_4V7E_032 | No text annotation | ||
| J3_4V7E_008 | No text annotation | ||
| J3_4V7E_009 | No text annotation | ||
| J3_4V7E_033 | No text annotation | ||
| J3_4V7E_034 | No text annotation | ||
| J3_4V7E_010 | No text annotation | ||
| J3_4V7E_035 | No text annotation | ||
| J3_4V7E_011 | No text annotation | ||
| J3_4V7E_036 | No text annotation | ||
| J3_4V7E_037 | No text annotation | ||
| J3_4V7E_012 | No text annotation | ||
| J3_4V7E_038 | No text annotation | ||
| J3_4V7E_049 | No text annotation | ||
| J3_4V7E_039 | No text annotation | ||
| J3_4V7E_050 | No text annotation | ||
| J3_4V7E_040 | No text annotation | ||
| J3_4V7E_051 | No text annotation | ||
| J3_4V7E_041 | No text annotation | ||
| J3_4V7E_042 | No text annotation | ||
| J3_4V7E_013 | No text annotation | ||
| J3_4V7E_014 | No text annotation | ||
| J3_4V7E_015 | No text annotation | ||
| J3_4V7E_016 | No text annotation | ||
| J3_4V7E_017 | No text annotation | ||
| J3_4V7E_018 | No text annotation | ||
| J3_4V7E_043 | No text annotation | ||
| J3_4V7E_019 | No text annotation | ||
| J3_4V7E_044 | No text annotation | ||
| J3_4V7E_020 | No text annotation | ||
| J3_4V7E_045 | No text annotation | ||
| J3_4V7E_046 | No text annotation | ||
| J3_4V7E_021 | No text annotation | ||
| J4_4V7E_001 | No text annotation | ||
| J4_4V7E_002 | No text annotation | ||
| J4_4V7E_003 | No text annotation | ||
| J4_4V7E_004 | No text annotation | ||
| J4_4V7E_005 | No text annotation | ||
| J4_4V7E_006 | No text annotation | ||
| J4_4V7E_007 | No text annotation | ||
| J4_4V7E_008 | No text annotation | ||
| J4_4V7E_009 | No text annotation | ||
| J4_4V7E_015 | No text annotation | ||
| J4_4V7E_010 | No text annotation | ||
| J4_4V7E_011 | No text annotation | ||
| J4_4V7E_012 | No text annotation | ||
| J4_4V7E_013 | No text annotation | ||
| J4_4V7E_014 | tRNA junction | ||
| J5_4V7E_001 | No text annotation | ||
| J5_4V7E_002 | No text annotation | ||
| J5_4V7E_008 | No text annotation | ||
| J5_4V7E_003 | No text annotation | ||
| J5_4V7E_004 | No text annotation | ||
| J5_4V7E_005 | No text annotation | ||
| J5_4V7E_006 | No text annotation | ||
| J5_4V7E_009 | No text annotation | ||
| J5_4V7E_007 | No text annotation | ||
| J6_4V7E_001 | No text annotation | ||
| J6_4V7E_004 | No text annotation | ||
| J6_4V7E_002 | No text annotation | ||
| J6_4V7E_005 | No text annotation | ||
| J6_4V7E_003 | No text annotation | ||
| J7_4V7E_001 | No text annotation |
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