HL_4V7E_037

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GGUUAAGAUUUC

Length

12 nucleotides

Bulged bases

4V7E|1|Aa|U|1603, 4V7E|1|Aa|U|1604

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Aa|G|1595
4V7E|1|Aa|G|1596
4V7E|1|Aa|U|1597
4V7E|1|Aa|U|1598
4V7E|1|Aa|A|1599
4V7E|1|Aa|A|1600
4V7E|1|Aa|G|1601
4V7E|1|Aa|A|1602
4V7E|1|Aa|U|1603
4V7E|1|Aa|U|1604
4V7E|1|Aa|U|1605
4V7E|1|Aa|C|1606

Current chains

Chain Aa

60S ribosomal RNA

Nearby chains

Chain CR

60S ribosomal protein L19E

Chain CX

60S ribosomal protein L23

Chain Cg

60S ribosomal protein L34E