HL_4V7E_051

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

AUCUAAUUAGU

Length

11 nucleotides

Bulged bases

4V7E|1|Aa|U|2293

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Aa|A|2286
4V7E|1|Aa|U|2287
4V7E|1|Aa|C|2288
4V7E|1|Aa|U|2289
4V7E|1|Aa|A|2290
4V7E|1|Aa|A|2291
4V7E|1|Aa|U|2292
4V7E|1|Aa|U|2293
4V7E|1|Aa|A|2294
4V7E|1|Aa|G|2295
4V7E|1|Aa|U|2296

Current chains

Chain Aa

60S ribosomal RNA

Nearby chains

Chain Ad

Small subunit ribosomal RNA; SSU rRNA

Chain CV

60S ribosomal protein L14