HL_4V7E_083

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

CCGACUUCUGGGAGGG

Length

16 nucleotides

Bulged bases

4V7E|1|Ad|G|192

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Ad|C|183
4V7E|1|Ad|C|184
4V7E|1|Ad|G|185
4V7E|1|Ad|A|186
4V7E|1|Ad|C|187
4V7E|1|Ad|U|188
4V7E|1|Ad|U|189
4V7E|1|Ad|C|190
4V7E|1|Ad|U|191
4V7E|1|Ad|G|192
4V7E|1|Ad|G|193
4V7E|1|Ad|G|194
4V7E|1|Ad|A|195
4V7E|1|Ad|G|196
4V7E|1|Ad|G|197
4V7E|1|Ad|G|198

Current chains

Chain Ad

18S ribosomal RNA

Nearby chains

Chain BI

40S ribosomal protein S8E