HL_4V7E_084

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GCGGGCUCUGCUCGC

Length

15 nucleotides

Bulged bases

4V7E|1|Ad|C|230, 4V7E|1|Ad|U|231

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Ad|G|225
4V7E|1|Ad|C|226
4V7E|1|Ad|G|227
4V7E|1|Ad|G|228
4V7E|1|Ad|G|229
4V7E|1|Ad|C|230
4V7E|1|Ad|U|231
4V7E|1|Ad|C|232
4V7E|1|Ad|U|233
4V7E|1|Ad|G|234
4V7E|1|Ad|C|235
4V7E|1|Ad|U|236
4V7E|1|Ad|C|237
4V7E|1|Ad|G|238
4V7E|1|Ad|C|239

Current chains

Chain Ad

18S ribosomal RNA

Nearby chains