HL_4V7E_122

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GCUGGGGCGGC

Length

11 nucleotides

Bulged bases

4V7E|1|Aa|G|2621

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Aa|G|2618
4V7E|1|Aa|C|2619
4V7E|1|Aa|U|2620
4V7E|1|Aa|G|2621
4V7E|1|Aa|G|2622
4V7E|1|Aa|G|2623
4V7E|1|Aa|G|2624
4V7E|1|Aa|C|2625
4V7E|1|Aa|G|2626
4V7E|1|Aa|G|2627
4V7E|1|Aa|C|2628

Current chains

Chain Aa

60S ribosomal RNA

Nearby chains

Chain Ae

Transfer RNA; tRNA

Chain CI

60S ribosomal protein L16

Chain CT

60S ribosomal protein L21E

Chain Cb

60S ribosomal protein L29E