HL_4V7E_126

3D structure

PDB id

4V7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GGCCUUCGUGCC

Length

12 nucleotides

Bulged bases

4V7E|1|Ad|U|281, 4V7E|1|Ad|U|284

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7E|1|Ad|G|276
4V7E|1|Ad|G|277
4V7E|1|Ad|C|278
4V7E|1|Ad|C|279
4V7E|1|Ad|U|280
4V7E|1|Ad|U|281
4V7E|1|Ad|C|282
4V7E|1|Ad|G|283
4V7E|1|Ad|U|284
4V7E|1|Ad|G|285
4V7E|1|Ad|C|286
4V7E|1|Ad|C|287

Current chains

Chain Ad

18S ribosomal RNA

Nearby chains

Chain BG

40S ribosomal protein S6