HL_4V7I_004
3D structure
- PDB id
- 4V7I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome-SecY complex.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.6 Å
Loop
- Sequence
- UGAUAUGAA
- Length
- 9 nucleotides
- Bulged bases
- 4V7I|1|A8|U|92
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7I_004 not in the Motif Atlas
- Homologous match to HL_5J7L_135
- Geometric discrepancy: 0.5912
- The information below is about HL_5J7L_135
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_80241.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4V7I|1|A8|U|87
4V7I|1|A8|G|88
4V7I|1|A8|A|89
4V7I|1|A8|U|90
4V7I|1|A8|A|91
4V7I|1|A8|U|92
4V7I|1|A8|G|93
4V7I|1|A8|A|94
4V7I|1|A8|A|95
Current chains
- Chain A8
- 23S ribosomal RNA
Nearby chains
- Chain AA
- PREPROTEIN TRANSLOCASE SECY SUBUNIT
- Chain AT
- 50S ribosomal protein L23
- Chain AU
- 50S ribosomal protein L24
- Chain AY
- 50S ribosomal protein L29
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