RNA 3D Hub //

4V7I Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4V7I_1041/A7/34:48No text annotation
homologous
HL_9DFE_067
HL_97756.2
HL_4V7I_0011/A7/38:44No text annotation
homologous
HL_5J7L_203
HL_47787.2
HL_4V7I_0021/A7/86:90Mini UNCG
geometric
HL_6TQA_003
HL_56334.1
HL_4V7I_0031/A8/59:68Pseudoknot geometry
geometric
HL_4GXY_003
HL_65794.5
HL_4V7I_0041/A8/87:95No text annotation
homologous
HL_5J7L_135
HL_80241.1
HL_4V7I_0051/A8/123:128No text annotation
homologous
HL_4WF9_003
HL_75660.5
HL_4V7I_0061/A8/137:142UNCG
geometric
HL_5LYS_002
HL_34617.5
HL_4V7I_0071/A8/158:168No text annotation
homologous
HL_5J7L_138
HL_68257.1
HL_4V7I_0081/A8/194:201No text annotation
geometric
HL_7RQB_006
NA
HL_4V7I_0091/A8/225:230No text annotation
homologous
HL_5J7L_140
HL_62934.1
HL_4V7I_0101/A8/246:252No text annotation
homologous
HL_7A0S_008
HL_37369.2
HL_4V7I_0111/A8/305:312T-loop with 2 stacked bulged bases
homologous
HL_5J7L_142
HL_01609.3
HL_4V7I_0121/A8/319:323No text annotation
homologous
HL_7A0S_011
HL_75660.5
HL_4V7I_0131/A8/327:335T-loop with unstacked turn
homologous
HL_7RQB_012
NA
HL_4V7I_1071/A8/382:392No text annotation
homologous
HL_5J7L_145
HL_91503.7
HL_4V7I_0151/A8/410:417No text annotation
homologous
HL_7RQB_014
NA
HL_4V7I_0161/A8/462:467GNRA
homologous
HL_5J7L_147
HL_37824.7
HL_4V7I_0171/A8/487:493GNRA
homologous
HL_5J7L_148
HL_37824.7
HL_4V7I_0181/A8/543:550Externally structured
geometric
HL_5TBW_022
NA
HL_4V7I_0191/A8/566:575T-loop with 2 stacked bulged bases
geometric
HL_4WF9_018
HL_28252.8
HL_4V7I_0201/A8/611:617No text annotation
homologous
HL_5J7L_151
HL_80922.2
HL_4V7I_0211/A8/629:634GNRA
homologous
HL_7RQB_020
NA
HL_4V7I_0221/A8/641:647GNRA
homologous
HL_4WF9_021
HL_37824.7
HL_4V7I_0231/A8/712:719GNRA wlth tandem sheared
homologous
HL_5J7L_154
HL_81538.2
HL_4V7I_0241/A8/744:753No text annotation
homologous
HL_7RQB_023
NA
HL_4V7I_0251/A8/779:785No text annotation
homologous
HL_4WF9_024
HL_87954.2
HL_4V7I_0261/A8/826:831No text annotation
homologous
HL_5J7L_157
HL_55195.3
HL_4V7I_0271/A8/885:891No text annotation
HL_4V7I_0281/A8/955:962GNRA
homologous
HL_7RQB_027
NA
HL_4V7I_0291/A8/978:985No text annotation
homologous
HL_4WF9_028
HL_42998.2
HL_4V7I_0301/A8/1064:1074No text annotation
homologous
HL_5J7L_161
HL_19210.3
HL_4V7I_0311/A8/1092:1099GNRA wlth tandem sheared
homologous
HL_6PRV_002
HL_81538.2
HL_4V7I_0321/A8/1172:1177No text annotation
HL_4V7I_0331/A8/1222:1227GNRA
homologous
HL_5J7L_164
HL_37824.7
HL_4V7I_0341/A8/1281:1289T-loop with 2 stacked bulged bases
homologous
HL_5J7L_165
HL_28252.8
HL_4V7I_0351/A8/1324:1330Pseudoknot geometry with 3' bulge
homologous
HL_5J7L_166
HL_57176.2
HL_4V7I_0361/A8/1363:1368GNRA
homologous
HL_4WF9_034
HL_37824.7
HL_4V7I_0371/A8/1389:1398No text annotation
homologous
HL_7RQB_036
NA
HL_4V7I_0381/A8/1450:1461No text annotation
HL_4V7I_0391/A8/1492:1498Pseudoknot geometry with 3' bulge
homologous
HL_5J7L_170
HL_57176.2
HL_4V7I_0401/A8/1533:1538UNCG
homologous
HL_5J7L_171
HL_34617.5
HL_4V7I_0411/A8/1565:1568Mini UNCG
homologous
HL_7A0S_039
HL_48778.2
HL_4V7I_0421/A8/1612:1619No text annotation
homologous
HL_7RQB_040
NA
HL_4V7I_0431/A8/1630:1636GNRA
homologous
HL_5J7L_174
HL_37824.7
HL_4V7I_0441/A8/1691:1696UNCG
homologous
HL_5J7L_175
HL_34617.5
HL_4V7I_0451/A8/1728:1731No text annotation
homologous
HL_5J7L_176
HL_32346.4
HL_4V7I_0461/A8/1752:1756No text annotation
homologous
HL_7RQB_044
NA
HL_4V7I_0471/A8/1777:1787No text annotation
homologous
HL_4WF9_043
HL_01962.2
HL_4V7I_0481/A8/1806:1811GNRA related
homologous
HL_5J7L_179
HL_04783.2
HL_4V7I_0491/A8/1868:1873GNRA
geometric
HL_4LFB_007
HL_37824.7
HL_4V7I_0501/A8/1910:1920No text annotation
homologous
HL_9DFE_046
HL_25847.2
HL_4V7I_0511/A8/1949:1957No text annotation
homologous
HL_5J7L_182
HL_20167.2
HL_4V7I_0521/A8/2027:2036No text annotation
homologous
HL_7A0S_049
HL_61996.2
HL_4V7I_0531/A8/2143:2148No text annotation
HL_4V7I_0541/A8/2209:2215No text annotation
homologous
HL_5J7L_185
HL_49922.4
HL_4V7I_0551/A8/2248:2256No text annotation
homologous
HL_4WF9_049
HL_85367.2
HL_4V7I_0561/A8/2264:2276No text annotation
homologous
HL_7A0S_053
HL_91939.2
HL_4V7I_0571/A8/2303:2313No text annotation
homologous
HL_7RQB_055
NA
HL_4V7I_0581/A8/2324:2331Pseudoknot geometry
homologous
HL_5J7L_189
HL_93324.4
HL_4V7I_0591/A8/2356:2361GNRA
homologous
HL_5J7L_190
HL_37824.7
HL_4V7I_0601/A8/2374:2379GNRA
homologous
HL_5J7L_191
HL_37824.7
HL_4V7I_0611/A8/2404:2413No text annotation
homologous
HL_5J7L_192
HL_53454.2
HL_4V7I_0621/A8/2471:2479No text annotation
homologous
HL_7A0S_059
HL_32735.2
HL_4V7I_0631/A8/2528:2535No text annotation
homologous
HL_5J7L_194
HL_31585.4
HL_4V7I_1061/A8/2551:2557No text annotation
homologous
HL_5J7L_195
HL_30068.2
HL_4V7I_0651/A8/2594:2599GNRA
homologous
HL_5J7L_196
HL_37824.7
HL_4V7I_0661/A8/2658:2663GNRA
homologous
HL_4WF9_060
HL_37824.7
HL_4V7I_0671/A8/2701:2706Ribsomal LSU H95
homologous
HL_7A0S_064
HL_65794.5
HL_4V7I_0681/A8/2745:2759No text annotation
homologous
HL_5J7L_199
HL_74055.2
HL_4V7I_0691/A8/2796:2800Mini UNCG
geometric
HL_5J7L_172
HL_48778.2
HL_4V7I_0701/A8/2819:2827No text annotation
homologous
HL_7A0S_067
HL_64690.6
HL_4V7I_0711/A8/2856:2861GNRA
homologous
HL_5J7L_202
HL_37824.7
HL_4V7I_0721/BA/12:22No text annotation
homologous
HL_4LFB_001
HL_89881.5
HL_4V7I_0731/BA/83:86No text annotation
HL_4V7I_0741/BA/158:163GNRA
homologous
HL_5J7L_003
HL_37824.7
HL_4V7I_0751/BA/186:191No text annotation
geometric
HL_5U3G_001
HL_75660.5
HL_4V7I_0761/BA/207:212UNCG
homologous
HL_5J7L_005
HL_34617.5
HL_4V7I_0771/BA/259:267GNRA related
homologous
HL_5J7L_006
HL_84299.4
HL_4V7I_0781/BA/296:301GNRA
homologous
HL_5J7L_007
HL_37824.7
HL_4V7I_0791/BA/320:333No text annotation
homologous
HL_4LFB_008
HL_81205.3
HL_4V7I_0801/BA/342:347UNCG
homologous
HL_4LFB_009
HL_34617.5
HL_4V7I_0811/BA/379:384GNRA
homologous
HL_5J7L_010
HL_37824.7
HL_4V7I_0821/BA/419:424UNCG
homologous
HL_5J7L_011
HL_34617.5
HL_4V7I_0831/BA/462:470No text annotation
HL_4V7I_0841/BA/522:527Externally structured
geometric
HL_5TBW_022
NA
HL_4V7I_0851/BA/617:623No text annotation
homologous
HL_5J7L_014
HL_10453.3
HL_4V7I_0861/BA/689:698No text annotation
homologous
HL_5J7L_015
HL_75293.5
HL_4V7I_0871/BA/726:731GNRA
homologous
HL_5J7L_016
HL_37824.7
HL_4V7I_0881/BA/786:796No text annotation
homologous
HL_5J7L_017
HL_75293.5
HL_4V7I_0891/BA/840:846No text annotation
geometric
HL_2Y8W_001
HL_81100.2
HL_4V7I_0901/BA/862:867GNRA
homologous
HL_5J7L_019
HL_37824.7
HL_4V7I_0911/BA/897:902GNRA
homologous
HL_5J7L_020
HL_37824.7
HL_4V7I_0921/BA/963:972No text annotation
homologous
HL_5J7L_021
HL_50779.4
HL_4V7I_0931/BA/1012:1017GNRA
homologous
HL_4LFB_022
HL_37824.7
HL_4V7I_0941/BA/1028:1033No text annotation
geometric
HL_5U3G_001
HL_75660.5
HL_4V7I_0951/BA/1076:1081GNRA
homologous
HL_5J7L_023
HL_37824.7
HL_4V7I_0961/BA/1089:1096T-loop related
homologous
HL_4LFB_025
HL_77436.5
HL_4V7I_0971/BA/1134:1140No text annotation
homologous
HL_6CZR_097
NA
HL_4V7I_0981/BA/1165:1171GNRA
homologous
HL_4LFB_027
HL_37824.7
HL_4V7I_0991/BA/1265:1270GNRA
homologous
HL_5J7L_027
HL_37824.7
HL_4V7I_1001/BA/1314:1323T-loop with 3 stacked bulged bases
homologous
HL_6CZR_100
NA
HL_4V7I_1011/BA/1356:1366No text annotation
homologous
HL_4LFB_030
HL_06226.4
HL_4V7I_1021/BA/1449:1454UNCG
homologous
HL_5J7L_030
HL_34617.5
HL_4V7I_1031/BA/1515:1520GNRA
geometric
HL_4WF9_034
HL_37824.7

Problematic loops

#loop idProblemSequence
HL_4V7I_014No text annotation
HL_4V7I_105No text annotation
HL_4V7I_064tRNA anticodon loop

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4V7I_0011/A7/17:18,
1/A7/65:67		Major groove intercalation
homologous
IL_5J7L_355
IL_31462.6
IL_4V7I_0021/A7/23:28,
1/A7/56:60		No text annotation
homologous
IL_7A0S_103
IL_18472.4
IL_4V7I_0031/A7/30:31,
1/A7/51:54		No text annotation
homologous
IL_8P9A_366
IL_15052.4
IL_4V7I_0041/A7/34:38,
1/A7/44:48		Symmetric double minor groove platform
geometric
IL_4V9F_104
IL_58103.11
IL_4V7I_0051/A7/71:79,
1/A7/97:105		Bacterial 5S Loop E
homologous
IL_7RQB_115
NA
IL_4V7I_0061/A8/24:30,
1/A8/510:516		Triple sheared with non-canonical cWW
homologous
IL_5J7L_245
IL_04021.2
IL_4V7I_0071/A8/36:37,
1/A8/442:444		Single bulged A
homologous
IL_5J7L_246
IL_31462.6
IL_4V7I_2021/A8/43:44,
1/A8/434:436		Minor groove platform
homologous
IL_9DFE_348
IL_51454.3
IL_4V7I_1871/A8/82:85,
1/A8/97:104		Kink-turn
geometric
IL_1U63_003
IL_24134.1
IL_4V7I_0101/A8/183:184,
1/A8/212:214		Single stack bend
homologous
IL_5J7L_249
IL_90729.1
IL_4V7I_0111/A8/188:194,
1/A8/201:208		8x7 Sarcin-Ricin; G-bulge
homologous
IL_7RQB_006
NA
IL_4V7I_0121/A8/239:245,
1/A8/253:258		7x6 Sarcin-Ricin; G-bulge
homologous
IL_5J7L_251
IL_26307.2
IL_4V7I_0131/A8/269:271,
1/A8/366:370		No text annotation
IL_4V7I_0141/A8/274:281,
1/A8/359:363		No text annotation
homologous
IL_5J7L_253
IL_77870.1
IL_4V7I_0151/A8/293:295,
1/A8/343:347		No text annotation
homologous
IL_4WF9_014
IL_69440.3
IL_4V7I_0161/A8/481:484,
1/A8/496:509		No text annotation
homologous
IL_5J7L_255
IL_81516.2
IL_4V7I_0171/A8/536:539,
1/A8/554:557		Double sheared
homologous
IL_5J7L_256
IL_09705.15
IL_4V7I_0181/A8/564:566,
1/A8/575:577		Isolated non-canonical cWW pair
homologous
IL_4WF9_017
IL_07785.1
IL_4V7I_0191/A8/606:610,
1/A8/618:622		AAA cross-strand stack
homologous
IL_5J7L_258
IL_66798.2
IL_4V7I_0201/A8/672:674,
1/A8/806:808		Isolated non-canonical cWW pair
geometric
IL_5TBW_046
NA
IL_4V7I_0211/A8/674:678,
1/A8/799:806		tHW-tHW cross-strand stack
homologous
IL_7RQB_018
NA
IL_4V7I_0221/A8/697:698,
1/A8/763:765		Single bulged A
geometric
IL_5J7L_261
IL_31462.6
IL_4V7I_0231/A8/702:703,
1/A8/728:730		Single bulged G
geometric
IL_5TBW_029
NA
IL_4V7I_0241/A8/703:707,
1/A8/724:728		Triple sheared
homologous
IL_4WF9_024
IL_50730.2
IL_4V7I_0251/A8/738:740,
1/A8/757:758		Major groove platform
homologous
IL_5J7L_264
IL_48076.6
IL_4V7I_0261/A8/775:777,
1/A8/787:791		Multiple bulged bases
homologous
IL_5J7L_265
IL_06549.2
IL_4V7I_0271/A8/837:838,
1/A8/940:942		Single stack bend
homologous
IL_4WF9_028
IL_90729.1
IL_4V7I_0281/A8/844:848,
1/A8/930:934		No text annotation
IL_4V7I_0291/A8/850:851,
1/A8/926:928		Single stack bend
homologous
IL_5J7L_269
IL_26793.1
IL_4V7I_0301/A8/856:862,
1/A8/915:921		7x7 Sarcin-Ricin with intercalated A; G-bulge
homologous
IL_5J7L_270
IL_29198.2
IL_4V7I_0311/A8/862:863,
1/A8/913:915		Single bulged G
geometric
IL_5J7L_271
IL_00225.13
IL_4V7I_0321/A8/864:868,
1/A8/909:912		C-loop
homologous
IL_5J7L_272
IL_26222.2
IL_4V7I_0331/A8/870:872,
1/A8/905:907		Isolated non-canonical cWW pair
homologous
IL_5J7L_273
IL_28037.2
IL_4V7I_0341/A8/875:880,
1/A8/897:902		No text annotation
IL_4V7I_0351/A8/880:881,
1/A8/895:897		No text annotation
IL_4V7I_0371/A8/994:996,
1/A8/1159:1160		Single bulged C
homologous
IL_7A0S_032
IL_61258.15
IL_4V7I_0381/A8/998:1002,
1/A8/1153:1157		UAA/GAN
homologous
IL_5J7L_277
IL_38507.2
IL_4V7I_0391/A8/1004:1011,
1/A8/1150:1151		SSU/LSU pseudoknot
homologous
IL_5J7L_278
IL_41203.4
IL_4V7I_0401/A8/1011:1013,
1/A8/1149:1150		Single bulged U
geometric
IL_7RQB_038
NA
IL_4V7I_0411/A8/1018:1024,
1/A8/1140:1144		Kink-turn related
homologous
IL_4WF9_039
IL_57188.5
IL_4V7I_0421/A8/1024:1030,
1/A8/1124:1140		No text annotation
geometric
IL_5J7L_281
IL_50715.3
IL_4V7I_0431/A8/1031:1034,
1/A8/1121:1123		Isolated non-canonical cWW pair
homologous
IL_7RQB_041
NA
IL_4V7I_0441/A8/1038:1041,
1/A8/1114:1117		Tandem non-canonical cWW pairs
homologous
IL_5J7L_283
IL_85033.2
IL_4V7I_0451/A8/1043:1051,
1/A8/1108:1112		Kink-turn
homologous
IL_7RQB_042
NA
IL_4V7I_0461/A8/1059:1062,
1/A8/1076:1079		No text annotation
homologous
IL_6PRV_001
IL_92446.2
IL_4V7I_0471/A8/1087:1090,
1/A8/1101:1102		Major groove platform
geometric
IL_7A0S_085
IL_48076.6
IL_4V7I_0481/A8/1196:1198,
1/A8/1247:1250		Isolated cWS basepair
homologous
IL_5J7L_286
IL_42997.3
IL_4V7I_0491/A8/1202:1206,
1/A8/1240:1243		No text annotation
homologous
IL_7RQB_046
NA
IL_4V7I_0501/A8/1208:1215,
1/A8/1234:1238		Kink-turn
homologous
IL_7A0S_043
IL_70923.9
IL_4V7I_0511/A8/1262:1269,
1/A8/2011:2017		8x7 Sarcin-Ricin; G-bulge
homologous
IL_5J7L_289
IL_04346.10
IL_4V7I_0521/A8/1310:1313,
1/A8/1603:1604		Major groove platform; stack outside cWW
homologous
IL_7RQB_050
NA
IL_4V7I_0541/A8/1319:1323,
1/A8/1331:1333		C-loop
homologous
IL_5J7L_291
IL_63596.11
IL_4V7I_0551/A8/1351:1355,
1/A8/1376:1380		UAA/GAN
homologous
IL_5J7L_292
IL_89021.2
IL_4V7I_0561/A8/1357:1361,
1/A8/1370:1374		tSH-tHW-tHS
homologous
IL_5J7L_293
IL_17136.7
IL_4V7I_0571/A8/1415:1416,
1/A8/1582:1587		No text annotation
homologous
IL_5J7L_294
IL_87211.1
IL_4V7I_0581/A8/1417:1421,
1/A8/1577:1581		UAA/GAN
homologous
IL_5J7L_295
IL_38507.2
IL_4V7I_0591/A8/1432:1435,
1/A8/1557:1561		Tandem non-canonical cWW pairs
homologous
IL_5J7L_296
IL_58112.2
IL_4V7I_2031/A8/1437:1440,
1/A8/1551:1555		No text annotation
IL_4V7I_0611/A8/1468:1471,
1/A8/1520:1524		No text annotation
homologous
IL_5J7L_299
IL_68574.4
IL_4V7I_0621/A8/1474:1478,
1/A8/1513:1517		tSH-tHW-tHS
homologous
IL_5J7L_300
IL_38862.4
IL_4V7I_0631/A8/1481:1482,
1/A8/1507:1510		No text annotation
IL_4V7I_0641/A8/1489:1491,
1/A8/1499:1500		Single bulged A
geometric
IL_5J7L_064
IL_31462.6
IL_4V7I_0651/A8/1526:1529,
1/A8/1542:1546		UAA/GAN variation
homologous
IL_5J7L_303
IL_23774.1
IL_4V7I_0661/A8/1651:1656,
1/A8/2004:2006		No text annotation
homologous
IL_4WF9_062
IL_12566.4
IL_4V7I_0671/A8/1663:1665,
1/A8/1995:1997		Isolated tWW turn
homologous
IL_7RQB_065
NA
IL_4V7I_0681/A8/1666:1669,
1/A8/1993:1994		Major groove platform; stack outside cWW
geometric
IL_5TBW_076
NA
IL_4V7I_1881/A8/1666:1674,
1/A8/1990:1994		No text annotation
homologous
IL_5J7L_386
IL_22854.4
IL_4V7I_0691/A8/1669:1674,
1/A8/1990:1993		Intercalated tWH
homologous
IL_5J7L_307
IL_76758.2
IL_4V7I_0701/A8/1686:1691,
1/A8/1696:1702		tSH-tSH-tHH-tHS
geometric
IL_4V9F_063
IL_47346.2
IL_4V7I_1891/A8/1712:1718,
1/A8/1742:1746		6x5 Sarcin-Ricin; G-bulge
homologous
IL_5J7L_309
IL_88269.4
IL_4V7I_0721/A8/1720:1724,
1/A8/1736:1740		Triple sheared
homologous
IL_5J7L_310
IL_50730.2
IL_4V7I_0731/A8/1727:1728,
1/A8/1731:1733		Single bulged C
geometric
IL_1DQF_001
IL_61258.15
IL_4V7I_0741/A8/1770:1771,
1/A8/1980:1982		Single bulged A
homologous
IL_7A0S_064
IL_31462.6
IL_4V7I_0751/A8/1798:1804,
1/A8/1813:1821		Kink-turn related
homologous
IL_7RQB_070
NA
IL_4V7I_0761/A8/1837:1840,
1/A8/1902:1903		Minor groove platform, major groove intercalation
homologous
IL_5J7L_314
IL_95583.2
IL_4V7I_0771/A8/1841:1842,
1/A8/1898:1901		Major groove intercalation
homologous
IL_4WF9_071
IL_82107.4
IL_4V7I_0781/A8/1846:1849,
1/A8/1893:1894		Minor groove platform
homologous
IL_7RQB_073
NA
IL_4V7I_1911/A8/1851:1860,
1/A8/1882:1891		No text annotation
homologous
IL_5J7L_387
IL_61249.1
IL_4V7I_0791/A8/1864:1867,
1/A8/1874:1878		UAA/GAN variation
homologous
IL_5J7L_317
IL_77691.5
IL_4V7I_0801/A8/1933:1934,
1/A8/1964:1967		Bulged stacked bases
geometric
IL_5TBW_089
NA
IL_4V7I_0811/A8/1934:1945,
1/A8/1961:1964		No text annotation
homologous
IL_7A0S_072
IL_04332.3
IL_4V7I_0821/A8/2050:2052,
1/A8/2617:2618		Major groove platform
homologous
IL_5J7L_320
IL_48076.6
IL_4V7I_0831/A8/2054:2056,
1/A8/2612:2615		Major groove platform with intercalation
geometric
IL_5TBW_092
NA
IL_4V7I_0841/A8/2067:2069,
1/A8/2442:2443		Single bulged U
homologous
IL_7RQB_080
NA
IL_4V7I_0851/A8/2070:2071,
1/A8/2438:2441		Minor groove platform
homologous
IL_5J7L_324
IL_51454.3
IL_4V7I_0861/A8/2081:2083,
1/A8/2236:2239		Isolated tHS basepair with bulges
homologous
IL_7A0S_077
IL_85599.2
IL_4V7I_0871/A8/2085:2087,
1/A8/2232:2234		Isolated non-canonical cWW pair
homologous
IL_5J7L_326
IL_28037.2
IL_4V7I_0891/A8/2103:2105,
1/A8/2184:2186		Isolated non-canonical cWW pair
geometric
IL_7L0Z_001
IL_28037.2
IL_4V7I_0901/A8/2108:2110,
1/A8/2179:2181		No text annotation
homologous
IL_7RQB_084
NA
IL_4V7I_0911/A8/2110:2122,
1/A8/2176:2179		No text annotation
IL_4V7I_0921/A8/2124:2127,
1/A8/2161:2174		No text annotation
homologous
IL_7RQB_086
NA
IL_4V7I_1931/A8/2124:2136,
1/A8/2155:2174		No text annotation
IL_4V7I_0931/A8/2127:2136,
1/A8/2155:2161		No text annotation
IL_4V7I_0951/A8/2202:2204,
1/A8/2220:2221		Single bulged U
homologous
IL_5J7L_331
IL_89505.4
IL_4V7I_0961/A8/2350:2353,
1/A8/2364:2367		Double sheared
homologous
IL_7RQB_089
NA
IL_4V7I_0971/A8/2401:2403,
1/A8/2414:2415		No text annotation
IL_4V7I_0981/A8/2453:2454,
1/A8/2498:2500		Single stack bend
homologous
IL_4WF9_089
IL_26793.1
IL_4V7I_0991/A8/2454:2455,
1/A8/2496:2498		Major groove platform
geometric
IL_4WF9_090
IL_48076.6
IL_4V7I_1001/A8/2457:2459,
1/A8/2493:2494		Major groove platform
homologous
IL_4WF9_091
IL_48076.6
IL_4V7I_1011/A8/2459:2461,
1/A8/2489:2493		Major groove minor groove platform with extra cWW
geometric
IL_4V9F_084
IL_51387.2
IL_4V7I_1021/A8/2466:2470,
1/A8/2480:2484		Triple sheared
homologous
IL_5J7L_338
IL_17948.2
IL_4V7I_1031/A8/2507:2508,
1/A8/2580:2582		Major groove platform
homologous
IL_7A0S_088
IL_07039.3
IL_4V7I_1041/A8/2510:2512,
1/A8/2574:2578		Isolated non-canonical cWW with bulges
homologous
IL_5J7L_340
IL_07785.1
IL_4V7I_1051/A8/2512:2513,
1/A8/2571:2574		No text annotation
geometric
IL_5J7L_341
IL_42626.2
IL_4V7I_1061/A8/2522:2523,
1/A8/2540:2543		Major groove platform with intercalation
homologous
IL_7A0S_091
IL_02555.1
IL_4V7I_1071/A8/2591:2592,
1/A8/2601:2603		Single bulged A
geometric
IL_4V88_441
NA
IL_4V7I_1081/A8/2636:2640,
1/A8/2774:2782		tSH-tHS-tHW
homologous
IL_5J7L_345
IL_04638.3
IL_4V7I_1091/A8/2652:2658,
1/A8/2663:2668		7x6 Sarcin-Ricin; G-bulge
geometric
IL_4V9F_106
IL_26307.2
IL_4V7I_1101/A8/2680:2684,
1/A8/2725:2727		C-loop
homologous
IL_7A0S_095
IL_63596.11
IL_4V7I_1111/A8/2687:2691,
1/A8/2718:2722		No text annotation
homologous
IL_5J7L_348
IL_23774.1
IL_4V7I_1121/A8/2695:2696,
1/A8/2711:2714		Multiple bulged bases
homologous
IL_5J7L_349
IL_42626.2
IL_4V7I_1131/A8/2737:2742,
1/A8/2762:2767		UAA/GAN with extra cWW
homologous
IL_5J7L_350
IL_49767.8
IL_4V7I_1141/A8/2806:2811,
1/A8/2889:2892		No text annotation
homologous
IL_5J7L_351
IL_29471.1
IL_4V7I_1151/A8/2838:2839,
1/A8/2878:2880		Major groove intercalation
homologous
IL_4WF9_106
IL_66635.5
IL_4V7I_2041/A8/2843:2846,
1/A8/2870:2874		Multiple bulged bases with non-canonical cWW
homologous
IL_5J7L_353
IL_64231.5
IL_4V7I_1171/A8/2847:2852,
1/A8/2865:2869		tHS double platform
homologous
IL_7RQB_110
NA
IL_4V7I_1181/BA/30:32,
1/BA/552:553		Single bulged G
homologous
IL_4LFB_001
IL_00225.13
IL_4V7I_1191/BA/44:45,
1/BA/396:398		Single bulged A
homologous
IL_5J7L_002
IL_31462.6
IL_4V7I_1201/BA/47:52,
1/BA/359:361		No text annotation
IL_4V7I_1221/BA/54:56,
1/BA/356:357		Minor groove platform
homologous
IL_5J7L_004
IL_51454.3
IL_4V7I_1231/BA/63:66,
1/BA/103:104		Multiple bulged bases
homologous
IL_4LFB_005
IL_82107.4
IL_4V7I_1241/BA/67:69,
1/BA/99:102		Minor groove platform with extra cWW
homologous
IL_5J7L_006
IL_90351.1
IL_4V7I_1251/BA/70:73,
1/BA/97:98		Minor groove platform
homologous
IL_5J7L_007
IL_15052.4
IL_4V7I_1261/BA/75:76,
1/BA/93:95		No text annotation
geometric
IL_6JQ5_004
IL_00225.13
IL_4V7I_1281/BA/128:131,
1/BA/231:233		Isolated non-canonical cWW pair
homologous
IL_5J7L_009
IL_57744.1
IL_4V7I_1291/BA/132:136,
1/BA/227:230		No text annotation
homologous
IL_4LFB_008
IL_64231.5
IL_4V7I_1301/BA/144:146,
1/BA/176:178		Isolated cWH basepair
homologous
IL_5J7L_011
IL_10167.6
IL_4V7I_1311/BA/147:153,
1/BA/168:175		tWH-tWH-tHW-tHW
homologous
IL_5J7L_012
IL_80604.6
IL_4V7I_2051/BA/203:206,
1/BA/213:214		Minor groove platform
geometric
IL_3IWN_005
IL_15052.4
IL_4V7I_1331/BA/242:247,
1/BA/277:284		Kink-turn with non-sequential stacking
homologous
IL_5J7L_014
IL_46174.3
IL_4V7I_1341/BA/249:252,
1/BA/274:275		No text annotation
homologous
IL_4LFB_012
IL_47074.2
IL_4V7I_1351/BA/292:293,
1/BA/304:308		C-loop
homologous
IL_5J7L_016
IL_03109.3
IL_4V7I_1361/BA/367:369,
1/BA/392:393		Single bulged U
homologous
IL_4LFB_014
IL_89505.4
IL_4V7I_2061/BA/371:375,
1/BA/389:390		C-loop
homologous
IL_5J7L_018
IL_03109.3
IL_4V7I_2071/BA/375:376,
1/BA/387:389		Single bulged G
homologous
IL_5J7L_019
IL_00225.13
IL_4V7I_1971/BA/409:416,
1/BA/427:433		No text annotation
homologous
IL_6CZR_359
NA
IL_4V7I_1391/BA/440:442,
1/BA/492:497		No text annotation
homologous
IL_5J7L_021
IL_33323.1
IL_4V7I_1401/BA/446:450,
1/BA/483:488		tSH-tHW-tWW
homologous
IL_5J7L_022
IL_88269.4
IL_4V7I_1411/BA/450:455,
1/BA/477:483		No text annotation
homologous
IL_4LFB_019
IL_31561.1
IL_4V7I_1421/BA/458:462,
1/BA/470:474		No text annotation
IL_4V7I_1431/BA/504:511,
1/BA/540:541		SSU/LSU pseudoknot
homologous
IL_5J7L_024
IL_41203.4
IL_4V7I_1441/BA/515:521,
1/BA/528:536		Kink-turn related
homologous
IL_5J7L_025
IL_54177.4
IL_4V7I_1451/BA/569:575,
1/BA/880:881		No text annotation
homologous
IL_5J7L_026
IL_38186.6
IL_4V7I_1461/BA/580:584,
1/BA/757:761		tSH-tHW-tHS
homologous
IL_5J7L_027
IL_17136.7
IL_4V7I_1471/BA/594:596,
1/BA/644:645		Major groove platform
homologous
IL_5J7L_028
IL_48076.6
IL_4V7I_1481/BA/597:598,
1/BA/640:643		Major groove minor groove platform; mini C-loop
homologous
IL_4LFB_025
IL_68140.4
IL_4V7I_1491/BA/605:612,
1/BA/628:633		No text annotation
homologous
IL_5J7L_030
IL_78349.3
IL_4V7I_1501/BA/654:655,
1/BA/751:754		Major groove platform; stack outside cWW
homologous
IL_5J7L_031
IL_50694.7
IL_4V7I_1511/BA/658:659,
1/BA/746:748		Single stack bend
homologous
IL_5J7L_032
IL_26793.1
IL_4V7I_1521/BA/662:666,
1/BA/740:743		Tandem non-canonical cWW pairs
homologous
IL_5J7L_033
IL_85033.2
IL_4V7I_1531/BA/673:678,
1/BA/712:717		No text annotation
homologous
IL_5J7L_034
NA
IL_4V7I_1541/BA/684:688,
1/BA/699:706		Kink-turn
homologous
IL_5J7L_035
IL_01488.3
IL_4V7I_1551/BA/774:778,
1/BA/804:805		Left turn
homologous
IL_5J7L_036
IL_29346.2
IL_4V7I_1561/BA/779:783,
1/BA/799:803		tSH-tHW-tHS
homologous
IL_5J7L_037
IL_17136.7
IL_4V7I_1581/BA/887:894,
1/BA/905:910		8x6 Sarcin-Ricin with inserted Y; G-bulge
homologous
IL_5J7L_038
IL_41756.4
IL_4V7I_1591/BA/922:923,
1/BA/1393:1395		Single bulged A
homologous
IL_4LFB_035
IL_31462.6
IL_4V7I_1601/BA/925:927,
1/BA/1390:1391		Single bulged G
homologous
IL_4LFB_036
IL_00225.13
IL_4V7I_1611/BA/933:935,
1/BA/1380:1384		Minor groove platform
homologous
IL_4LFB_037
IL_47078.3
IL_4V7I_1991/BA/933:936,
1/BA/1379:1384		No text annotation
homologous
IL_6CZR_149
NA
IL_4V7I_1621/BA/953:954,
1/BA/1226:1228		Minor groove platform
homologous
IL_4LFB_038
IL_51454.3
IL_4V7I_1631/BA/993:997,
1/BA/1044:1045		Minor groove platform
homologous
IL_5J7L_043
IL_47078.3
IL_4V7I_1641/BA/998:999,
1/BA/1041:1043		Single stack bend
homologous
IL_5J7L_044
IL_26793.1
IL_4V7I_1651/BA/1048:1050,
1/BA/1208:1209		Single bulged U
homologous
IL_4LFB_042
IL_89505.4
IL_4V7I_1661/BA/1052:1056,
1/BA/1204:1206		Isolated cWS basepair
homologous
IL_4LFB_044
IL_76319.5
IL_4V7I_1671/BA/1057:1058,
1/BA/1199:1203		Minor groove platform
homologous
IL_5J7L_048
IL_95583.2
IL_4V7I_1681/BA/1060:1061,
1/BA/1195:1197		Single bulged A
homologous
IL_5J7L_049
IL_31462.6
IL_4V7I_1691/BA/1061:1063,
1/BA/1193:1195		Isolated non-canonical cWW pair
geometric
IL_4LFB_047
IL_28037.2
IL_4V7I_1711/BA/1124:1128,
1/BA/1144:1149		No text annotation
homologous
IL_5J7L_051
IL_06691.1
IL_4V7I_1721/BA/1129:1132,
1/BA/1142:1143		Minor groove platform
homologous
IL_5J7L_052
IL_15052.4
IL_4V7I_2001/BA/1158:1161,
1/BA/1175:1181		No text annotation
geometric
IL_5J7L_053
IL_42032.1
IL_4V7I_1741/BA/1247:1253,
1/BA/1284:1290		No text annotation
homologous
IL_5J7L_054
IL_09129.2
IL_4V7I_1751/BA/1255:1258,
1/BA/1277:1282		180 degree turn
homologous
IL_4LFB_052
IL_11344.2
IL_4V7I_1761/BA/1259:1263,
1/BA/1272:1276		Triple sheared
homologous
IL_5J7L_056
IL_17948.2
IL_4V7I_1771/BA/1303:1308,
1/BA/1329:1334		No text annotation
geometric
IL_4V88_462
NA
IL_4V7I_1781/BA/1399:1401,
1/BA/1501:1504		No text annotation
geometric
IL_5J7L_058
IL_61438.4
IL_4V7I_1791/BA/1401:1404,
1/BA/1497:1501		No text annotation
geometric
IL_4V88_464
NA
IL_4V7I_1801/BA/1405:1407,
1/BA/1494:1496		Isolated non-canonical cWW pair
geometric
IL_5MWI_005
NA
IL_4V7I_1811/BA/1407:1409,
1/BA/1491:1494		Isolated non-canonical cWW pair
geometric
IL_5J7L_009
IL_57744.1
IL_4V7I_1821/BA/1412:1414,
1/BA/1486:1488		Isolated non-canonical cWW pair
homologous
IL_4LFB_059
IL_87907.2
IL_4V7I_1831/BA/1416:1419,
1/BA/1481:1484		Double sheared
homologous
IL_5J7L_062
IL_09705.15
IL_4V7I_1841/BA/1430:1435,
1/BA/1466:1470		Triple sheared related
homologous
IL_5J7L_063
IL_80231.1
IL_4V7I_2011/BA/1440:1442,
1/BA/1460:1461		Single bulged A
homologous
IL_5J7L_064
IL_31462.6
IL_4V7I_1861/BA/1445:1448,
1/BA/1455:1457		No text annotation

Problematic loops

#loop idProblemSequence
IL_4V7I_008Minor groove platform with extra cWW
IL_4V7I_009No text annotation
IL_4V7I_036Isolated non-canonical cWW pair
IL_4V7I_053Isolated non-canonical cWW pair
IL_4V7I_060No text annotation
IL_4V7I_071No text annotation
IL_4V7I_190Isolated non-canonical cWW pair
IL_4V7I_088Isolated non-canonical cWW pair
IL_4V7I_192Other IL
IL_4V7I_094No text annotation
IL_4V7I_194No text annotation
IL_4V7I_116No text annotation
IL_4V7I_195No text annotation
IL_4V7I_121No text annotation
IL_4V7I_127Isolated non-canonical cWW pair
IL_4V7I_132No text annotation
IL_4V7I_196No text annotation
IL_4V7I_137C-loop with extra cWW pair
IL_4V7I_138No text annotation
IL_4V7I_198Kink-turn
IL_4V7I_157Isolated non-canonical cWW pair
IL_4V7I_170No text annotation
IL_4V7I_173No text annotation
IL_4V7I_185No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_4V7I_0011/A7/10:16,
1/A7/68:70,
1/A7/106:110		No text annotation
J3_4V7I_0211/A8/30:31,
1/A8/474:481,
1/A8/509:510		No text annotation
geometric
J3_8VTW_036
NA
J3_4V7I_0221/A8/30:31,
1/A8/474:484,
1/A8/496:510		No text annotation
homologous
J3_4WF9_011
J3_92134.2
J3_4V7I_0231/A8/32:35,
1/A8/445:461,
1/A8/468:473		No text annotation
homologous
J3_9DFE_003
J3_30040.2
J3_4V7I_0241/A8/56:57,
1/A8/70:76,
1/A8/110:114		No text annotation
homologous
J3_9DFE_004
J3_35667.2
J3_4V7I_0021/A8/683:689,
1/A8/773:775,
1/A8/791:794		No text annotation
homologous
J3_4WF9_002
J3_64189.2
J3_4V7I_0031/A8/698:700,
1/A8/732:736,
1/A8/760:763		No text annotation
homologous
J3_5J7L_039
J3_44724.7
J3_4V7I_0041/A8/1055:1057,
1/A8/1081:1087,
1/A8/1102:1104		No text annotation
homologous
J3_6PRV_001
J3_28621.5
J3_4V7I_0051/A8/1298:1303,
1/A8/1625:1627,
1/A8/1639:1642		No text annotation
homologous
J3_7RQB_007
NA
J3_4V7I_0061/A8/1306:1309,
1/A8/1605:1611,
1/A8/1620:1622		No text annotation
homologous
J3_7A0S_007
J3_71677.1
J3_4V7I_0251/A8/1344:1350,
1/A8/1381:1385,
1/A8/1402:1403		No text annotation
J3_4V7I_0261/A8/1424:1429,
1/A8/1564:1565,
1/A8/1568:1574		No text annotation
homologous
J3_9DFE_013
J3_34864.2
J3_4V7I_0071/A8/2091:2093,
1/A8/2196:2200,
1/A8/2223:2228		Kink-turn in J3
homologous
J3_5J7L_044
J3_89368.5
J3_4V7I_0271/A8/2282:2284,
1/A8/2384:2395,
1/A8/2421:2427		No text annotation
homologous
J3_5J7L_070
J3_20992.1
J3_4V7I_0081/A8/2295:2299,
1/A8/2317:2323,
1/A8/2332:2337		No text annotation
homologous
J3_5J7L_071
J3_44961.1
J3_4V7I_0091/A8/2517:2520,
1/A8/2545:2547,
1/A8/2561:2567		No text annotation
homologous
J3_5J7L_046
J3_32601.5
J3_4V7I_0281/A8/2789:2791,
1/A8/2805:2806,
1/A8/2892:2894		No text annotation
homologous
J3_5J7L_047
J3_30104.1
J3_4V7I_0101/A8/2812:2815,
1/A8/2831:2836,
1/A8/2882:2888		No text annotation
homologous
J3_5J7L_048
J3_64069.1
J3_4V7I_0291/BA/46:47,
1/BA/361:367,
1/BA/393:395		No text annotation
geometric
J3_5J7L_001
J3_67856.4
J3_4V7I_0371/BA/46:52,
1/BA/359:367,
1/BA/393:395		No text annotation
homologous
J3_5J7L_050
J3_46317.4
J3_4V7I_0311/BA/586:588,
1/BA/651:654,
1/BA/754:755		No text annotation
geometric
J3_4LFB_011
J3_56052.5
J3_4V7I_0321/BA/586:588,
1/BA/651:655,
1/BA/751:755		No text annotation
homologous
J3_5J7L_051
J3_17385.4
J3_4V7I_0331/BA/672:673,
1/BA/717:725,
1/BA/732:734		No text annotation
homologous
J3_6CZR_017
NA
J3_4V7I_0111/BA/826:829,
1/BA/857:861,
1/BA/868:874		No text annotation
homologous
J3_5J7L_004
J3_85054.4
J3_4V7I_0121/BA/936:939,
1/BA/1344:1350,
1/BA/1372:1379		No text annotation
homologous
J3_4LFB_002
J3_25303.4
J3_4V7I_0131/BA/943:946,
1/BA/1235:1237,
1/BA/1337:1340		No text annotation
homologous
J3_5J7L_005
J3_52655.4
J3_4V7I_0141/BA/955:962,
1/BA/973:984,
1/BA/1221:1225		No text annotation
homologous
J3_5J7L_006
J3_83516.4
J3_4V7I_0151/BA/990:993,
1/BA/1045:1047,
1/BA/1210:1215		No text annotation
homologous
J3_4LFB_005
J3_82572.1
J3_4V7I_0341/BA/990:997,
1/BA/1044:1047,
1/BA/1210:1215		No text annotation
homologous
J3_5J7L_053
J3_76475.2
J3_4V7I_0161/BA/1003:1006,
1/BA/1023:1027,
1/BA/1034:1037		No text annotation
J3_4V7I_0171/BA/1063:1068,
1/BA/1107:1113,
1/BA/1187:1193		No text annotation
homologous
J3_5J7L_008
J3_08394.3
J3_4V7I_0351/BA/1073:1074,
1/BA/1083:1086,
1/BA/1099:1102		No text annotation
homologous
J3_4LFB_017
J3_79369.1
J3_4V7I_0181/BA/1116:1118,
1/BA/1155:1158,
1/BA/1181:1184		No text annotation
homologous
J3_5J7L_010
J3_82365.4
J3_4V7I_0361/BA/1116:1118,
1/BA/1155:1161,
1/BA/1175:1184		No text annotation
homologous
J3_4LFB_018
J3_17791.2
J3_4V7I_0191/BA/1237:1241,
1/BA/1296:1303,
1/BA/1334:1337		No text annotation
homologous
J3_4LFB_009
J3_37047.6
J4_4V7I_0011/A8/268:269,
1/A8/370:375,
1/A8/399:406,
1/A8/421:424		No text annotation
homologous
J4_5J7L_018
J4_45801.6
J4_4V7I_0021/A8/297:301,
1/A8/316:319,
1/A8/323:325,
1/A8/337:341		No text annotation
homologous
J4_9DFE_002
J4_71729.5
J4_4V7I_0031/A8/601:604,
1/A8/624:628,
1/A8/635:638,
1/A8/650:656		No text annotation
homologous
J4_5J7L_020
J4_60168.1
J4_4V7I_0041/A8/1270:1276,
1/A8/1294:1295,
1/A8/1645:1648,
1/A8/2009:2010		No text annotation
homologous
J4_7A0S_004
J4_64571.5
J4_4V7I_0051/A8/1310:1314,
1/A8/1338:1343,
1/A8/1404:1405,
1/A8/1597:1604		No text annotation
homologous
J4_9DFE_004
J4_69051.6
J4_4V7I_0061/A8/1313:1314,
1/A8/1338:1343,
1/A8/1404:1405,
1/A8/1597:1603		No text annotation
homologous
J4_5J7L_023
J4_10313.5
J4_4V7I_0071/A8/1444:1445,
1/A8/1466:1467,
1/A8/1525:1526,
1/A8/1546:1547		No text annotation
homologous
J4_5J7L_024
J4_24280.2
J4_4V7I_0081/A8/1772:1776,
1/A8/1788:1792,
1/A8/1827:1830,
1/A8/1975:1979		No text annotation
homologous
J4_9DFE_007
J4_61477.5
J4_4V7I_0091/A8/1833:1835,
1/A8/1905:1906,
1/A8/1924:1933,
1/A8/1967:1972		No text annotation
homologous
J4_9DFE_008
J4_93343.1
J4_4V7I_0101/A8/2285:2289,
1/A8/2343:2347,
1/A8/2370:2372,
1/A8/2381:2383		No text annotation
homologous
J4_5J7L_027
J4_04930.6
J4_4V7I_0111/A8/2643:2646,
1/A8/2674:2676,
1/A8/2731:2735,
1/A8/2769:2771		No text annotation
homologous
J4_4WF9_009
J4_77044.4
J4_4V7I_0121/BA/115:122,
1/BA/239:240,
1/BA/286:289,
1/BA/311:312		No text annotation
homologous
J4_5J7L_001
J4_35578.3
J4_4V7I_0131/BA/142:144,
1/BA/178:184,
1/BA/193:198,
1/BA/219:221		No text annotation
homologous
J4_5J7L_002
J4_01665.1
J4_4V7I_0151/BA/575:577,
1/BA/764:769,
1/BA/810:821,
1/BA/879:880		No text annotation
homologous
J4_5J7L_003
J4_61885.6
J5_4V7I_0011/A8/47:54,
1/A8/116:121,
1/A8/130:131,
1/A8/148:150,
1/A8/176:178		No text annotation
homologous
J5_9DFE_001
J5_01737.2
J5_4V7I_0021/A8/531:533,
1/A8/560:564,
1/A8/577:579,
1/A8/1261:1262,
1/A8/2017:2018		No text annotation
homologous
J5_5J7L_014
J5_43153.5
J5_4V7I_0031/A8/584:589,
1/A8/668:671,
1/A8/809:812,
1/A8/1195:1196,
1/A8/1250:1256		No text annotation
homologous
J5_5J7L_015
J5_74302.5
J5_4V7I_0041/A8/1674:1682,
1/A8/1706:1707,
1/A8/1751:1752,
1/A8/1756:1764,
1/A8/1988:1990		No text annotation
homologous
J5_5J7L_016
J5_62523.6
J5_4V7I_0101/A8/2057:2064,
1/A8/2446:2453,
1/A8/2500:2506,
1/A8/2583:2588,
1/A8/2606:2611		No text annotation
J5_4V7I_0061/A8/2074:2077,
1/A8/2243:2246,
1/A8/2258:2259,
1/A8/2281:2282,
1/A8/2427:2435		No text annotation
homologous
J5_9DFE_007
J5_39529.1
J5_4V7I_0071/BA/36:39,
1/BA/403:406,
1/BA/436:440,
1/BA/497:500,
1/BA/545:548		No text annotation
homologous
J5_5J7L_001
J5_92941.1
J5_4V7I_0081/BA/36:39,
1/BA/403:406,
1/BA/436:442,
1/BA/492:500,
1/BA/545:548		No text annotation
homologous
J5_5J7L_002
J5_67416.1
J5_4V7I_0091/BA/58:61,
1/BA/106:113,
1/BA/314:316,
1/BA/337:339,
1/BA/350:354		No text annotation
homologous
J5_5J7L_003
J5_59910.6
J6_4V7I_0011/A8/45:46,
1/A8/179:183,
1/A8/214:224,
1/A8/231:235,
1/A8/262:266,
1/A8/426:433		No text annotation
J6_4V7I_0021/A8/2074:2077,
1/A8/2243:2246,
1/A8/2258:2259,
1/A8/2281:2284,
1/A8/2384:2395,
1/A8/2421:2435		No text annotation
J7_4V7I_0011/A8/8:15,
1/A8/525:531,
1/A8/2018:2023,
1/A8/2040:2043,
1/A8/2625:2630,
1/A8/2788:2789,
1/A8/2894:2895		No text annotation
J7_4V7I_0021/A8/817:822,
1/A8/835:837,
1/A8/942:946,
1/A8/971:976,
1/A8/987:991,
1/A8/1163:1164,
1/A8/1185:1190		No text annotation

Problematic loops

#loop idProblemSequence
J3_4V7I_020No text annotation
J3_4V7I_030No text annotation
J4_4V7I_014No text annotation
J5_4V7I_005No text annotation

Coloring options:
Copyright 2025 BGSU RNA group. Page generated in 0.1005 s