HL_4V7I_015

3D structure

PDB id

4V7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome-SecY complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.6 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

4V7I|1|A8|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7I_015 not in the Motif Atlas

Homologous match to HL_7RQB_014

Geometric discrepancy: 0.2437

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

4V7I|1|A8|G|410
4V7I|1|A8|G|411
4V7I|1|A8|A|412
4V7I|1|A8|C|413
4V7I|1|A8|C|414
4V7I|1|A8|A|415
4V7I|1|A8|U|416
4V7I|1|A8|C|417

Current chains

Chain A8

23S ribosomal RNA

Nearby chains