HL_4V7I_025

3D structure

PDB id

4V7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome-SecY complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.6 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

4V7I|1|A8|A|781

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7I_025 not in the Motif Atlas

Homologous match to HL_4WF9_024

Geometric discrepancy: 0.2959

The information below is about HL_4WF9_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

4V7I|1|A8|U|779
4V7I|1|A8|G|780
4V7I|1|A8|A|781
4V7I|1|A8|A|782
4V7I|1|A8|A|783
4V7I|1|A8|G|784
4V7I|1|A8|G|785

Current chains

Chain A8

23S ribosomal RNA

Nearby chains

Chain A6

50S ribosomal protein L2