HL_4V7I_029

3D structure

PDB id

4V7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome-SecY complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.6 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7I_029 not in the Motif Atlas

Homologous match to HL_4WF9_028

Geometric discrepancy: 0.5424

The information below is about HL_4WF9_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4V7I|1|A8|G|978
4V7I|1|A8|A|979
4V7I|1|A8|A|980
4V7I|1|A8|A|981
4V7I|1|A8|C|982
4V7I|1|A8|A|983
4V7I|1|A8|A|984
4V7I|1|A8|C|985

Current chains

Chain A8

23S ribosomal RNA

Nearby chains

Chain AQ

50S ribosomal protein L20