HL_4V7I_075

3D structure

PDB id

4V7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome-SecY complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.6 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7I_075 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3368

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4V7I|1|BA|C|186
4V7I|1|BA|G|187
4V7I|1|BA|C|188
4V7I|1|BA|A|189
4V7I|1|BA|A|190
4V7I|1|BA|G|191

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BT

30S ribosomal protein S20