HL_4V7I_094

3D structure

PDB id

4V7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome-SecY complex.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.6 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4V7I|1|BA|U|1030

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7I_094 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2194

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4V7I|1|BA|C|1028
4V7I|1|BA|U|1029
4V7I|1|BA|U|1030
4V7I|1|BA|C|1031
4V7I|1|BA|G|1032
4V7I|1|BA|G|1033

Current chains

Chain BA

16S ribosomal RNA

Nearby chains