HL_4V7J_137

3D structure

PDB id

4V7J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (precleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCGAAGACAGCCAGUCGAGU

Length

20 nucleotides

Bulged bases

4V7J|1|BA|A|1045, 4V7J|1|BA|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7J|1|BA|G|1042
4V7J|1|BA|C|1043
4V7J|1|BA|G|1044
4V7J|1|BA|A|1045
4V7J|1|BA|A|1046
4V7J|1|BA|G|1047
4V7J|1|BA|A|1048
4V7J|1|BA|C|1049
4V7J|1|BA|A|1050
4V7J|1|BA|G|1051
4V7J|1|BA|C|1052
4V7J|1|BA|C|1053
4V7J|1|BA|A|1106
4V7J|1|BA|G|1107
4V7J|1|BA|U|1108
4V7J|1|BA|C|1109
4V7J|1|BA|G|1110
4V7J|1|BA|A|1111
4V7J|1|BA|G|1112
4V7J|1|BA|U|1113

Current chains

Chain BA

RNA (2848-MER)

Nearby chains

Chain BH

50S ribosomal protein L6

Chain BJ

50S ribosomal protein L10