HL_4V7J_191

3D structure

PDB id

4V7J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (precleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGACGAG

Length

7 nucleotides

Bulged bases

4V7J|1|Ba|C|470

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7J_191 not in the Motif Atlas

Homologous match to HL_4LFB_012

Geometric discrepancy: 0.1506

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4V7J|1|Ba|C|458
4V7J|1|Ba|G|460
4V7J|1|Ba|A|461
4V7J|1|Ba|C|470
4V7J|1|Ba|G|471
4V7J|1|Ba|A|472
4V7J|1|Ba|G|473

Current chains

Chain Ba

RNA (1504-MER)

Nearby chains

Chain Bp

30S ribosomal protein S16