HL_4V7J_220

3D structure

PDB id

4V7J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (precleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGGACGGAAAUCC

Length

13 nucleotides

Bulged bases

4V7J|1|AA|G|2307, 4V7J|1|AA|A|2310

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7J|1|AA|G|2302
4V7J|1|AA|G|2303
4V7J|1|AA|G|2304
4V7J|1|AA|A|2305
4V7J|1|AA|C|2306
4V7J|1|AA|G|2307
4V7J|1|AA|G|2308
4V7J|1|AA|A|2309
4V7J|1|AA|A|2310
4V7J|1|AA|A|2311
4V7J|1|AA|U|2312
4V7J|1|AA|C|2313
4V7J|1|AA|C|2314

Current chains

Chain AA

RNA (2848-MER)

Nearby chains

Chain AB

5S ribosomal RNA; 5S rRNA

Chain AG

50S ribosomal protein L5

Chain Av

Transfer RNA; tRNA