HL_4V7J_226

3D structure

PDB id

4V7J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (precleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCGCGAAAGCGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7J|1|Aa|C|1162
4V7J|1|Aa|C|1163
4V7J|1|Aa|G|1164
4V7J|1|Aa|C|1165
4V7J|1|Aa|G|1166
4V7J|1|Aa|A|1168
4V7J|1|Aa|A|1169
4V7J|1|Aa|A|1170
4V7J|1|Aa|G|1171
4V7J|1|Aa|C|1172
4V7J|1|Aa|G|1173
4V7J|1|Aa|G|1174

Current chains

Chain Aa

RNA (1504-MER)

Nearby chains

Chain Ab

30S ribosomal protein S2

Chain Ag

30S ribosomal protein S7