HL_4V7K_023
3D structure
- PDB id
- 4V7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GGUGAGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7K_023 not in the Motif Atlas
- Homologous match to HL_7RQB_022
- Geometric discrepancy: 0.0906
- The information below is about HL_7RQB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84085.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
4V7K|1|AA|G|712
4V7K|1|AA|G|713
4V7K|1|AA|U|714
4V7K|1|AA|G|715
4V7K|1|AA|A|716
4V7K|1|AA|G|717
4V7K|1|AA|A|718
4V7K|1|AA|C|719
Current chains
- Chain AA
- RNA (2848-MER)
Nearby chains
- Chain AD
- 50S ribosomal protein L2
- Chain Aa
- Small subunit ribosomal RNA; SSU rRNA
- Chain Ao
- 30S ribosomal protein S15
- Chain Aq
- 30S ribosomal protein S17
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