HL_4V7K_186

3D structure

PDB id

4V7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GCUUUGC

Length

7 nucleotides

Bulged bases

4V7K|1|Ba|U|202, 4V7K|1|Ba|U|204

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7K_186 not in the Motif Atlas

Homologous match to HL_6CZR_076

Geometric discrepancy: 0.3279

The information below is about HL_6CZR_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

4V7K|1|Ba|G|200
4V7K|1|Ba|C|201
4V7K|1|Ba|U|202
4V7K|1|Ba|U|203
4V7K|1|Ba|U|204
4V7K|1|Ba|G|216
4V7K|1|Ba|C|217

Current chains

Chain Ba

RNA (1504-MER)

Nearby chains