HL_4V7K_242
3D structure
- PDB id
- 4V7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7K_242 not in the Motif Atlas
- Homologous match to HL_5E81_212
- Geometric discrepancy: 0.1294
- The information below is about HL_5E81_212
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.6
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4V7K|1|Av|G|31
4V7K|1|Av|C|32
4V7K|1|Av|U|33
4V7K|1|Av|C|34
4V7K|1|Av|A|35
4V7K|1|Av|U|36
4V7K|1|Av|A|37
4V7K|1|Av|A|38
4V7K|1|Av|C|39
Current chains
- Chain Av
- RNA (77-MER)
Nearby chains
- Chain Aa
- Small subunit ribosomal RNA; SSU rRNA
- Chain Ai
- 30S ribosomal protein S9
- Chain Aw
- Transfer RNA; tRNA
- Chain Ax
- RNA (5'-R(*A*AP*GP*UP*AP*AP*AP*AP*AP*UP*GP*UP*A*(CCC))-3')
- Chain Ay
- Toxin relE
Coloring options: