HL_4V7L_201
3D structure
- PDB id
- 4V7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of viomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CCUCCGGG
- Length
- 8 nucleotides
- Bulged bases
- 4V7L|1|DA|C|2145
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7L_201 not in the Motif Atlas
- Geometric match to HL_6CF2_001
- Geometric discrepancy: 0.3948
- The information below is about HL_6CF2_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87553.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4V7L|1|DA|C|2142
4V7L|1|DA|C|2143
4V7L|1|DA|U|2144
4V7L|1|DA|C|2145
4V7L|1|DA|C|2146
4V7L|1|DA|G|2147
4V7L|1|DA|G|2148
4V7L|1|DA|G|2149
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain CK
- 30S ribosomal protein S11
- Chain CY
- Transfer RNA; tRNA
Coloring options: