HL_4V7M_155

3D structure

PDB id

4V7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of Capreomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

GCUUGC

Length

6 nucleotides

Bulged bases

4V7M|1|DA|U|157, 4V7M|1|DA|U|158

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7M_155 not in the Motif Atlas

Homologous match to HL_7RQB_005

Geometric discrepancy: 0.3115

The information below is about HL_7RQB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7M|1|DA|G|154
4V7M|1|DA|C|154|||A
4V7M|1|DA|U|157
4V7M|1|DA|U|158
4V7M|1|DA|G|171
4V7M|1|DA|C|172

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D1

50S ribosomal protein L28