HL_4V7M_230

3D structure

PDB id

4V7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of Capreomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

GUUGCCAGCGGUUCGGCCGGGCACUC

Length

26 nucleotides

Bulged bases

4V7M|1|CA|U|1125, 4V7M|1|CA|U|1136, 4V7M|1|CA|C|1137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7M|1|CA|G|1124
4V7M|1|CA|U|1125
4V7M|1|CA|U|1126
4V7M|1|CA|G|1127
4V7M|1|CA|C|1128
4V7M|1|CA|C|1129
4V7M|1|CA|A|1130
4V7M|1|CA|G|1131
4V7M|1|CA|C|1132
4V7M|1|CA|G|1133
4V7M|1|CA|G|1134
4V7M|1|CA|U|1135
4V7M|1|CA|U|1136
4V7M|1|CA|C|1137
4V7M|1|CA|G|1138
4V7M|1|CA|G|1139
4V7M|1|CA|C|1140
4V7M|1|CA|C|1141
4V7M|1|CA|G|1142
4V7M|1|CA|G|1143
4V7M|1|CA|G|1144
4V7M|1|CA|C|1145
4V7M|1|CA|A|1146
4V7M|1|CA|C|1147
4V7M|1|CA|U|1148
4V7M|1|CA|C|1149

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CI

30S ribosomal protein S9

Chain CJ

30S ribosomal protein S10